(8)
OTHER.mut
(3)
OVARY
(5)
PIWI.ip
(3)
PIWI.mut
(29)
TESTES

Sense strand
GGAGTCTCTTCCCGCACGCCATCTGCCTCGGAGACGTGGATAACGACGCGGTGAGTGCATGCGCACTGCAAACCACTGCATTTGGGCGGAGCGAGATGGGGGTGGTGGGAACGACACGATGGCGTGTTGTGCGCTTGCGCACTGGAGTCAACATGGCGTGCGGAACAGAAAATTTTGATTGACAGTATCGCTCTGAGACCGTCACTGCAGGAGGCTTAGTTGGGCCAGAGCCTCTAGTAGTTATTTTTTG


Size Perfect hit Total Norm Perfect Norm SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesWT1()
Testes Data. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR037898(GSM510434)
ovary_rep3. (ovary)
SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
.......................TGCCTCGGAGACGTGGATAACGACGC......................................................................................................................................................................................................... 26 1 11.00 11.00 3.00 - 2.00 - 1.00 - - - - 2.00 1.00 - - - - - - 1.00 - - - - - 1.00 - - - - - - - -
.......................TGCCTCGGAGACGTGGATAACGACGCG........................................................................................................................................................................................................ 27 1 7.00 7.00 3.00 - 3.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.......................TGCCTCGGAGACGTGGATAACGACGCGt....................................................................................................................................................................................................... 28 t 6.00 7.00 1.00 - 2.00 - - - - - - - - - 2.00 - - - - - - - - 1.00 - - - - - - - - - -
.........................................................................................................................................................................................TATCGCTCTGAGACCGTCACTGCAGGAGGCTTA................................ 33 1 6.00 6.00 - 6.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................TAACGACGCGGTGAGTGCATGC............................................................................................................................................................................................ 22 1 5.00 5.00 - - - - - - - 5.00 - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................ACCGTCACTGCAGGAGGCT.................................. 19 1 5.00 5.00 - - - - 3.00 - - - - - - - - - - - - - - - - - - - 1.00 - - 1.00 - - - -
.....................................................................................................................................................................................................ACCGTCACTGCAGGAGGCTTAG............................... 22 1 4.00 4.00 - - - 3.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.......................TGCCTCGGAGACGTGGATAACGACGCGtt...................................................................................................................................................................................................... 29 tt 4.00 7.00 - - - - - - - - - - - - 1.00 - - - - 1.00 - - - - 1.00 - - - - - - - - 1.00
................................................................................................................................................................................GATTGACAGTATCGCTCTGAGA.................................................... 22 1 3.00 3.00 - - - 3.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................ACAGTATCGCTCTGAGACC.................................................. 19 1 3.00 3.00 - - - - - - - - 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - -
.....................................................................................................................................................................................ACAGTATCGCTCTGAGAC................................................... 18 1 3.00 3.00 - - - 1.00 - - - - 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................GCTCTGAGACCGTCACTGC.......................................... 19 1 2.00 2.00 - - - - - - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................CTGAGACCGTCACTGCAGGAGGCT.................................. 24 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................CAGTATCGCTCTGAGACC.................................................. 18 1 2.00 2.00 - - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - -
.....................TCTGCCTCGGAGACGTGGATAACGAC........................................................................................................................................................................................................... 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................TGAGACCGTCACTGCAGGAGGCTT................................. 24 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................ACCGTCACTGCAGGAGGCTTAGTTGG........................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
........................................................................................................................................GCGCACTGGAGTCAACAT................................................................................................ 18 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................AGACCGTCACTGCAGGAGGCTTAGTTG............................ 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
....................ATCTGCCTCGGAGACGTG.................................................................................................................................................................................................................... 18 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................TGCCTCGGAGACGTGGATAACGACGCGa....................................................................................................................................................................................................... 28 a 1.00 7.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
.........................................................................................................................................................................................TATCGCTCTGAGACCG................................................. 16 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
..........................................................ATGCGCACTGCAAACCACTG............................................................................................................................................................................ 20 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................TCTGCCTCGGAGACGTGGATAACGACGC......................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................CTCTGAGACCGTCACTGCAGGAGGCT.................................. 26 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.........................................................................................................................................CGCACTGGAGTCAACATGGCG............................................................................................ 21 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................GAGACCGTCACTGCAGGAGGCT.................................. 22 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
................................................................................................................................................................................GATTGACAGTATCGCTCTGAGAC................................................... 23 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................CGGAGACGTGGATAACGACGCGG....................................................................................................................................................................................................... 23 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................CGTGCGGAACAGAAAATTTTGAa....................................................................... 23 a 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
...........................................................................................................................................CACTGGAGTCAACATGGCGTG.......................................................................................... 21 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................GCTCTGAGACCGTCACTG........................................... 18 2 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
..........................................................................................................................................GCACTGGAGTCAACATGGCGTG.......................................................................................... 22 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................CCTCGGAGACGTGGATAACGACGCGt....................................................................................................................................................................................................... 26 t 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................ATGGCGTGCGGAACAGAA................................................................................ 18 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................CGCTCTGAGACCGTCACTGCAG........................................ 22 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................TGCAAACCACTGCATTTGGGCGGAGC.............................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................GCGGAACAGAAAATTTTGATTGAC................................................................... 24 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
........................................................................................................................................................ATGGCGTGCGGAACAGAAAATTTa.......................................................................... 24 a 1.00 0.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
...............................................................................................................................................GGAGTCAACATGGCGTGCGGAACAG.................................................................................. 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................TGCCTCGGAGACGTGGATAACGACGCGac...................................................................................................................................................................................................... 29 ac 1.00 7.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................TATCGCTCTGAGACCGTCACTGCAGGAag.................................... 29 ag 1.00 0.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................ACCGTCACTGCAGGAGGC................................... 18 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................GGCGTGCGGAACAGAAAATT............................................................................ 20 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................ACATGGCGTGCGGAACAGAA................................................................................ 20 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................AGTCAACATGGCGTGCGGAACA................................................................................... 22 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................GAGACCGTCACTGCAGGAGGCTTA................................ 24 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................GAGACCGTCACTGCAGGAGGCTTAG............................... 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
...............................................................................................................................................................................................TCTGAGACCGTCACTGCAGGAGGCTT................................. 26 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................TGATTGACAGTATCGCTCTGAGACC.................................................. 25 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................TCGCTCTGAGACCGTCACTGCAGGAG..................................... 26 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................ACAGTATCGCTCTGAGACCGTCAC............................................. 24 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Antisense strand
GGAGTCTCTTCCCGCACGCCATCTGCCTCGGAGACGTGGATAACGACGCGGTGAGTGCATGCGCACTGCAAACCACTGCATTTGGGCGGAGCGAGATGGGGGTGGTGGGAACGACACGATGGCGTGTTGTGCGCTTGCGCACTGGAGTCAACATGGCGTGCGGAACAGAAAATTTTGATTGACAGTATCGCTCTGAGACCGTCACTGCAGGAGGCTTAGTTGGGCCAGAGCCTCTAGTAGTTATTTTTTG


Size Perfect hit Total Norm Perfect Norm SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesWT1()
Testes Data. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR037898(GSM510434)
ovary_rep3. (ovary)
SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
...GTCTCTTCCCGCACGCCA..................................................................................................................................................................................................................................... 18 1 2.00 2.00 - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...................CATCTGCCTCGGAGACGT..................................................................................................................................................................................................................... 18 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................ACGACGCGGTGAGTGCATGCGCACTGC..................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
.....................TCTGCCTCGGAGACGTGGATAAC.............................................................................................................................................................................................................. 23 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...GTCTCTTCCCGCACGCCAT.................................................................................................................................................................................................................................... 19 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........TCCCGCACGCCATCTGCCTCGGA.......................................................................................................................................................................................................................... 23 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
............................CGGAGACGTGGATAACGACGCGGT...................................................................................................................................................................................................... 24 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
.........................................................TGCGCACTGCAAACCACTac............................................................................................................................................................................. 20 ac 1.00 0.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -