| Gene: Ndufa9 | ID: uc009dve.1_intron_5_0_chr6_126786340_r.3p | SPECIES: mm9 |
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(2) PIWI.ip |
(1) PIWI.mut |
(8) TESTES |
| AAGTTCTGGGTGTGGGGTGTTTGCTTGTTCTTGTGTTTGTGTGTGTGTGTGTGTTTTGTGACTAATATGATTATCTTCTGAAATTGTGGTTACCGAATGAACTTCGGGCCTTGGTGATGTGAGCAGTGTGTGATGGGGAGGGGCGGCAGGGAGTCCTGTGCACTCGCTGTGGAACCGAGAATGCTTTATTTTTGGTTTAGGCAGTGGGAGAGAAGGAAGTGAGAAGTGTGTTTCCTGAAGCCATCATCAT .........................................................((.((((.((..(((.((....)))))..))....(((((.....)))))....)))).)).................................................................................................................................... ..................................................51.....................................................................122.............................................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................TGTGACTAATATGATTATCTTCTGAAATTGTGGTTACCGAATGAACTTCGGG.............................................................................................................................................. | 52 | 1 | 30.00 | 30.00 | 30.00 | - | - | - | - | - | - | - |
| .................................................................................................TGAACTTCGGGCCTTGGTGATGTGAGC.............................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - |
| ............................................................................................................................................................................................................TGGGAGAGAAGGAAGTGAGAAGTGTGT................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................................................................................................................................TGAGAAGTGTGTTTCCTGAAGCCATC..... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - |
| ........................................................................................................................................................................................................................AAGTGAGAAGTGTGTTTCCTGAAG.......... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 |
| ...........................................................................................................................................................................................................................TGAGAAGTGTGTTTCCTGAAGCCATCATC.. | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - |
| ........................................................................................................................................................................................TTTATTTTTGGTTTAGGCAGTGGGAG........................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - |
| .......................................................................................................................................................................................................GGCAGTGGGAGAGAAGGAAGTGAGA.......................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................AGTGGGAGAGAAGGAAGTGAGAAGTGT..................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - |
| AAGTTCTGGGTGTGGGGTGTTTGCTTGTTCTTGTGTTTGTGTGTGTGTGTGTGTTTTGTGACTAATATGATTATCTTCTGAAATTGTGGTTACCGAATGAACTTCGGGCCTTGGTGATGTGAGCAGTGTGTGATGGGGAGGGGCGGCAGGGAGTCCTGTGCACTCGCTGTGGAACCGAGAATGCTTTATTTTTGGTTTAGGCAGTGGGAGAGAAGGAAGTGAGAAGTGTGTTTCCTGAAGCCATCATCAT .........................................................((.((((.((..(((.((....)))))..))....(((((.....)))))....)))).)).................................................................................................................................... ..................................................51.....................................................................122.............................................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
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| .........................................................................TCTTCTGAAATTGTGG................................................................................................................................................................. | 16 | 4 | 0.25 | 0.25 | - | - | 0.25 | - | - | - | - | - |