| Gene: Lrrc23 | ID: uc009dru.1_intron_6_0_chr6_124729194_r | SPECIES: mm9 |
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(1) OTHER.ip |
(3) OTHER.mut |
(1) PIWI.ip |
(3) PIWI.mut |
(1) TDRD1.ip |
(20) TESTES |
| CTCAGCACAAAGATCCTCTCCTTAACTACTTCTAGAGGAGCAGAGTCAGGGTCTGCGCCCACTTCTGAAGGCGAACTGGGTTGGAGGGTTGAAGACTTCGTGTCAGGGAAATGGTGGTGTTAAGCAAAGAGGCCGCATTAGAAGAGGGGTTGGGGTGGAAGGGAACCCAACCCGGAGGTGAGGTGTGGGTAAAGAAGGGGAGGAGGAGTAGGTAGGGGAGATTTTAGGAGGACATGTAGAACTGTATCAAAGGGAATTGAGGAAGGAGGACGCTGGGCTGCTGGGACACTGTTGGAGGCAAGTGACAGCAGGAACAGTCCGGGAGTGTGGGAAAGTGTCCTGAAGGGAGCAGGGGTGGAGTGGGAGGAGGCTCCGAGCAGAGACTGGGAGTCCAAAGACGGTCTCCAGCATGAGGAAAGATGCACAAGTGGGAGTTCAGAGGAGACAGACTGTATAGGGCACCTGTAGCTGGAGGTGAGGGACTGGAGGGTTGGGGGGGTGGGAGCTAAGACCTTCTTTCTCAGGACCAGGACTGAGTCTCATCTGACTCCAGAGCGCAGGGCAGAGAAAGATG ....................................................................................................................................................................................................................................(((((((((....((...((((......))))...))....)).(((.(((.(((((...((((((...........))))))......))))).))).)))....)))))))....(((((...................)))))........................................................................................................................................................................................................ ..................................................................................................................................................................................................................................227...................................................................................................................................................377................................................................................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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| .......................................................................................................................................................................................................................................ACATGTAGAACTGTATCAAAGGGAATTGA.......................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................TGGGAAAGTGTCCTGAAGGGAGCAGG............................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................TGAAGGCGAACTGGGTTGGAGGGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................GGAGGACATGTAGAACTGTATCAAAGG................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................GACATGTAGAACTGTATCAAAGGGAAT............................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................GTAGAACTGTATCAAAGGGAATTGAG......................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................TCAAAGGGAATTGAGGAAGGAGGACGCTGc.......................................................................................................................................................................................................................................................................................................... | 30 | c | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................TGCTGGGACACTGTTGGAGGCAAGTGA............................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................TCAAAGGGAATTGAGGAAGGAGGACGC............................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TAGAAGAGGGGTTGGGGTGGAAGGG........................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................................................................................................................................................................ACATGTAGAACTGTATCAAAGGGAATT............................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................TAACTACTTCTAGAGGAGCAGAGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................CTGAAGGCGAACTGGGTTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................TAGGAGGACATGTAGAACTGTATCAAAGG................................................................................................................................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................................................................................................................................................................................................................................................................................................................GGGTGGAGTGGGAGGAGGggg......................................................................................................................................................................................................... | 21 | ggg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................................................................................................................................................................................................................TGTAGAACTGTATCAAAGGGAATTGAGGA....................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................TGGTGTTAAGCAAAGAGGCCGCATTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................AACTGTATCAAAGGGAATTGAGGAAGG.................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ............................................................................................................................................................................................................................................TAGAACTGTATCAAAGGGAATTGAGG........................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................ACATGTAGAACTGTATCAAAGGGAATTGAttt....................................................................................................................................................................................................................................................................................................................... | 32 | ttt | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................GACATGTAGAACTGTATCAAAGGGAATTGAGG........................................................................................................................................................................................................................................................................................................................ | 32 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................TATCAAAGGGAATTGAGGAAGGAGGAC............................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................CATGTAGAACTGTATCAAAGGGAATTGAGGt....................................................................................................................................................................................................................................................................................................................... | 31 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................TGGGACACTGTTGGAGGCAAGTGACAG.......................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................TAGAACTGTATCAAAGGGAATTGAGGAAGGt................................................................................................................................................................................................................................................................................................................... | 31 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................TATCAAAGGGAATTGAGGAAGGAGGACGC............................................................................................................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................GACATGTAGAACTGTATCAAAGGGAA.............................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................TCAAAGGGAATTGAGGAAGGAGGACG.............................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................TGGGCTGCTGGGACACTGTTGGAGGC................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGACTGGAGGGTT.................................................................................. | 16 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 |
| CTCAGCACAAAGATCCTCTCCTTAACTACTTCTAGAGGAGCAGAGTCAGGGTCTGCGCCCACTTCTGAAGGCGAACTGGGTTGGAGGGTTGAAGACTTCGTGTCAGGGAAATGGTGGTGTTAAGCAAAGAGGCCGCATTAGAAGAGGGGTTGGGGTGGAAGGGAACCCAACCCGGAGGTGAGGTGTGGGTAAAGAAGGGGAGGAGGAGTAGGTAGGGGAGATTTTAGGAGGACATGTAGAACTGTATCAAAGGGAATTGAGGAAGGAGGACGCTGGGCTGCTGGGACACTGTTGGAGGCAAGTGACAGCAGGAACAGTCCGGGAGTGTGGGAAAGTGTCCTGAAGGGAGCAGGGGTGGAGTGGGAGGAGGCTCCGAGCAGAGACTGGGAGTCCAAAGACGGTCTCCAGCATGAGGAAAGATGCACAAGTGGGAGTTCAGAGGAGACAGACTGTATAGGGCACCTGTAGCTGGAGGTGAGGGACTGGAGGGTTGGGGGGGTGGGAGCTAAGACCTTCTTTCTCAGGACCAGGACTGAGTCTCATCTGACTCCAGAGCGCAGGGCAGAGAAAGATG ....................................................................................................................................................................................................................................(((((((((....((...((((......))))...))....)).(((.(((.(((((...((((((...........))))))......))))).))).)))....)))))))....(((((...................)))))........................................................................................................................................................................................................ ..................................................................................................................................................................................................................................227...................................................................................................................................................377................................................................................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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