(7)
OTHER.mut
(4)
PIWI.ip
(1)
PIWI.mut
(26)
TESTES

Sense strand
GGCGTCCGCCTCGGCTCAGCCCGCGGCCCTGAGCGCGGAGCAGGCCAAGGGTGAGGAAAGAGCCTAGTCTGGGTGTGGGCCGTCTTCTGGGGGGAGGGCGCGATACTATTCTTTGCCTCTCCAAGTGGGGCCCTTGCCCATTAGGGCGAAGGGTTGGGAGGACAAGCTTATCGGGTTGCTTGCAGGCCTCGGCCCACTAATTCCCTGCCTCTTCCCTCCTCTGGGCTCGCCCGCCGTCCTCCGCGGACCTCTCTGGGATGCTTCCGTCTCGCAGTGGTCCTGGCGGAGGTGATTCAAGCGTTCTCGGCCCCAGAGAATGCCGTG


Size Perfect hit Total Norm Perfect Norm SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesWT4()
Testes Data. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesWT3()
Testes Data. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
GSM509276(GSM509276)
small RNA cloning by length. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
........................................................................................................................................................................................................................................................................................TGGCGGAGGTGATTCAAGCGTTCTCGG................. 27 1 16.00 16.00 - 5.00 4.00 - - - 3.00 - 3.00 - - - - - 1.00 - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................TGGCGGAGGTGATTCAAGCGTTCTCGGC................ 28 1 12.00 12.00 1.00 3.00 4.00 - 1.00 - - - 2.00 - - - 1.00 - - - - - - - - - - - - -
.............................TGAGCGCGGAGCAGGCCAAGGtggt.............................................................................................................................................................................................................................................................................. 25 tggt 10.00 0.00 3.00 1.00 - - 2.00 - - - - 2.00 - - - - - 1.00 - 1.00 - - - - - - - -
............................................................................................................................................TTAGGGCGAAGGGTTGGGAGGAC................................................................................................................................................................. 23 1 6.00 6.00 - - - 6.00 - - - - - - - - - - - - - - - - - - - - - -
.............................TGAGCGCGGAGCAGGCCAAGGtgg............................................................................................................................................................................................................................................................................... 24 tgg 6.00 0.00 1.00 - - - - 2.00 - - - - 2.00 - - - - - 1.00 - - - - - - - - -
.............................................................................................................................................TAGGGCGAAGGGTTGGGAGGACAA............................................................................................................................................................... 24 1 4.00 4.00 - - - 4.00 - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................TCCTGGCGGAGGTGATTCAAGCGTTC..................... 26 1 3.00 3.00 - 1.00 - - - - - - 1.00 - 1.00 - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................TGGCGGAGGTGATTCAAGCGTTCTCGGt................ 28 t 3.00 16.00 - 2.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.............................TGAGCGCGGAGCAGGCCAAGGGT................................................................................................................................................................................................................................................................................ 23 1 3.00 3.00 2.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.............................TGAGCGCGGAGCAGGCCAAGGGTGA.............................................................................................................................................................................................................................................................................. 25 1 3.00 3.00 2.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.......................CGGCCCTGAGCGCGGAGCAGGC....................................................................................................................................................................................................................................................................................... 22 1 2.00 2.00 - - - - - - - - - 2.00 - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................................................................................TGATTCAAGCGTTCTCGGCCCCAGAG......... 26 1 2.00 2.00 - 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...........................CCTGAGCGCGGAGCAGGCCAAGG.................................................................................................................................................................................................................................................................................. 23 1 2.00 2.00 - - - - - - 2.00 - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................TGGCGGAGGTGATTCAAGCGTTCTCG.................. 26 1 2.00 2.00 - - - - - - - - - - 1.00 - - 1.00 - - - - - - - - - - - -
...................................................TGAGGAAAGAGCCTAGTCTGGGTGTG....................................................................................................................................................................................................................................................... 26 1 2.00 2.00 - - - - - 1.00 - - - 1.00 - - - - - - - - - - - - - - - -
....................................................GAGGAAAGAGCCTAGTCTGGGTGTGG...................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
.....................................................................................................................................................................................................................................................................................TCCTGGCGGAGGTGATTCAA........................... 20 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
...........................................................................................................................................................................................................................................................................................CGGAGGTGATTCAAGCGTTCTCGGCC............... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
.............................TGAGCGCGGAGCAGGCCAAGGGTGt.............................................................................................................................................................................................................................................................................. 25 t 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................................................................TCGCAGTGGTCCTGGCGGAGGTGAatt............................. 27 att 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................TCGGGTTGCTTGCAGGCCTCGGCCCACT.............................................................................................................................. 28 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
........................................................................GTGTGGGCCGTCTTCTGG.......................................................................................................................................................................................................................................... 18 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................TGGCGGAGGTGATTCAAGCGTTC..................... 23 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................TATCGGGTTGCTTGCAGGCCTCGGCCC................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
..................................................................................................................................................................................................................................................................................TGGTCCTGGCGGAGGTGATTCAAGCG........................ 26 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
............................CTGAGCGCGGAGCAGGCCAAGGGggtc............................................................................................................................................................................................................................................................................. 27 ggtc 1.00 0.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................TCCTGGCGGAGGTGATTCAAGCGTT...................... 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00
...........................................................................................................................................................................CGGGTTGCTTGCgccg......................................................................................................................................... 16 gccg 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................TGCCTCTTCCCTCCTCTGGGCTCGCCCGt.......................................................................................... 29 t 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
......................................................................................CTGGGGGGAGGGCGCGATACTA........................................................................................................................................................................................................................ 22 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.............................TGAGCGCGGAGCAGGCCAAGGG................................................................................................................................................................................................................................................................................. 22 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
................................................................................................................TTGCCTCTCCAAGTGGGG.................................................................................................................................................................................................. 18 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
.....................CGCGGCCCTGAGCGCGGAGCAG......................................................................................................................................................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
...................................................................................................................................................................................................................................................................................GGTCCTGGCGGAGGTGATTCAAGCGT....................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
.................................................................................................................................................GCGAAGGGTTGGGAGGACAAGCT............................................................................................................................................................ 23 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...........................CCTGAGCGCGGAGCAGGCCA..................................................................................................................................................................................................................................................................................... 20 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................TTATCGGGTTGCTTGCAGGCCTCGGC................................................................................................................................... 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................TTCAAGCGTTCTCGGCCCCAGAGAAT...... 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................TGGGATGCTTCCGTCTCGCAGTGGTC............................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
..........................................................................................GGGGAGGGCGCGATA........................................................................................................................................................................................................................... 15 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................TGGCGGAGGTGATTCAAGCGTTCTC................... 25 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
................................................................TAGTCTGGGTGTGGGCCGTCTTCTGGGG........................................................................................................................................................................................................................................ 28 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
......................................................GGAAAGAGCCTAGTCTGGGTGTGG...................................................................................................................................................................................................................................................... 24 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................GAGGTGATTCAAGCGTTCTCGGCCCCAGt.......... 29 t 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................TTATCGGGTTGCTTGCAGGCCTCGGCCC................................................................................................................................. 28 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................TTAGGGCGAAGGGTTGGGAGGACAA............................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................TGCTTCCGTCTCGCAGTGGTCCTGG......................................... 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................TAGTCTGGGTGTGGGCCGTCTTCTGatc........................................................................................................................................................................................................................................ 28 atc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
............................CTGAGCGCGGAGCAGGC....................................................................................................................................................................................................................................................................................... 17 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................TCGGGTTGCTTGagag.......................................................................................................................................... 16 agag 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.............................TGAGCGCGGAGCAGGC....................................................................................................................................................................................................................................................................................... 16 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.............................TGAGCGCGGAGCAGGCCAAGGGTGAG............................................................................................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
........................................................................................................................................................................TATCGGGTTGCTTGCAGGCCTCGGCCCAa............................................................................................................................... 29 a 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................TAGGGCGAAGGGTTGGGAGGACAAG.............................................................................................................................................................. 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................AAGGGTTGGGAGGACAAG.............................................................................................................................................................. 18 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.........................................................AAGAGCCTAGTCTGGGTGTGG...................................................................................................................................................................................................................................................... 21 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
....................................................................................................................................................................................................................TCCCTCCTCTGGGCTCGCCCGCCGTCCTa................................................................................... 29 a 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
......................GCGGCCCTGAGCGCGGAGCAGG........................................................................................................................................................................................................................................................................................ 22 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................GGCGGAGGTGATTCAAGCGTTCTCGG................. 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.......................CGGCCCTGAGCGCGGAGCAGGCC...................................................................................................................................................................................................................................................................................... 23 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................................CGCGGACCTCTCTGGGATGC............................................................... 20 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
.............................TGAGCGCGGAGCAGGCCAAGGtg................................................................................................................................................................................................................................................................................ 23 tg 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -

Antisense strand
GGCGTCCGCCTCGGCTCAGCCCGCGGCCCTGAGCGCGGAGCAGGCCAAGGGTGAGGAAAGAGCCTAGTCTGGGTGTGGGCCGTCTTCTGGGGGGAGGGCGCGATACTATTCTTTGCCTCTCCAAGTGGGGCCCTTGCCCATTAGGGCGAAGGGTTGGGAGGACAAGCTTATCGGGTTGCTTGCAGGCCTCGGCCCACTAATTCCCTGCCTCTTCCCTCCTCTGGGCTCGCCCGCCGTCCTCCGCGGACCTCTCTGGGATGCTTCCGTCTCGCAGTGGTCCTGGCGGAGGTGATTCAAGCGTTCTCGGCCCCAGAGAATGCCGTG


Size Perfect hit Total Norm Perfect Norm SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesWT4()
Testes Data. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesWT3()
Testes Data. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
GSM509276(GSM509276)
small RNA cloning by length. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
.........................................................................................................................................................................................................................................................TCTCTGGGATGCTTCCGTCTCGCA................................................... 24 1 2.00 2.00 - - - - - 2.00 - - - - - - - - - - - - - - - - - - - -
...................................................................................CTTCTGGGGGGAGGGCGCGATACTA........................................................................................................................................................................................................................ 25 1 2.00 2.00 - - - - - - - 2.00 - - - - - - - - - - - - - - - - - -
.................................................................................GTCTTCTGGGGGGAGGGCGCGATACTA........................................................................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................GCAGTGGTCCTGGCGGAGGTGATTCAA........................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
................................................................................................................................................................................................CCCACTAATTCCCTGCCTCTTCCCTCC......................................................................................................... 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...GTCCGCCTCGGCTCAGCCCGC............................................................................................................................................................................................................................................................................................................ 21 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................TCCTGGCGGAGGTGATTCAA........................... 20 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................CGCCCGCCGTCCTCCGtgg................................................................................. 19 tgg 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -