| Gene: Pex26 | ID: uc009doc.1_intron_0_0_chr6_121134501_f.5p | SPECIES: mm9 |
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(3) OTHER.mut |
(5) PIWI.ip |
(2) PIWI.mut |
(19) TESTES |
| ACTTGCGAACGAGCCTGGCAGAGCCTGGCGGAGGAGCCCGTGAGTGGCACGTACGTGCTGAGCTATGTTCCGTTCTGGATCCTTTTGGGGAGGAACTCGGGTCTCTGAATATCTGGCATTGTGAGACTGCGCCAACCACACACCTTGCTTTCCCTAAGGGATCCTCTTTGAGAGAGGCTGGTTGCTCATCCTGCACCCGTGAGACTGTACAATGAAGTCAAATCATGCAACAATTTGGAGGGACGCCACA ..............................................((((....)))).(((((..(((((.(((..((....))..))).)))))...)).)))........((((.............)))).................................................................................................................... ..............................................47.......................................................................................136................................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................TGAATATCTGGCATTGTGAGACTGCGC...................................................................................................................... | 27 | 1 | 26.00 | 26.00 | 6.00 | 7.00 | 2.00 | - | 3.00 | 4.00 | 1.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | - | 1.00 | - |
| .........................................................................................................TGAATATCTGGCATTGTGAGACTGC........................................................................................................................ | 25 | 1 | 15.00 | 15.00 | - | - | - | 7.00 | 1.00 | - | 4.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................TGAATATCTGGCATTGTGAGACTGCG....................................................................................................................... | 26 | 1 | 12.00 | 12.00 | 2.00 | 1.00 | 6.00 | - | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TCTGAATATCTGGCATTGTGAGACTGC........................................................................................................................ | 27 | 1 | 7.00 | 7.00 | 1.00 | - | - | 4.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................TGAATATCTGGCATTGTGAGACTGCGCC..................................................................................................................... | 28 | 1 | 7.00 | 7.00 | 1.00 | - | - | - | 4.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................TCTGAATATCTGGCATTGTGAGACTG......................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............TGGCAGAGCCTGGCGGAGGAGCCCG.................................................................................................................................................................................................................. | 25 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................TGAGACTGTACAATGAAGTCAAATCATGC...................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................AGCCTGGCGGAGGAGCCCGTGAGTGGCACa....................................................................................................................................................................................................... | 30 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............TGGCAGAGCCTGGCGGAGGAGCCCGTa................................................................................................................................................................................................................ | 27 | a | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................TGAGACTGTACAATGAAGTCAAATCATG....................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TGGCGGAGGAGCCCGTGAGTGGCACaat..................................................................................................................................................................................................... | 28 | aat | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TGCACCCGTGAGACTGTACAATGAAGTC............................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TCTGAATATCTGGCATTGTGAGACTGCGt...................................................................................................................... | 29 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............TGGCAGAGCCTGGCGGAGGAGCCCGT................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TCCTGCACCCGTGAGACTGTACAAT..................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .......................................................................................................................................................................................................TGAGACTGTACAATGAAG................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................TGAATATCTGGCATTGTGAGACTGCGCCAA................................................................................................................... | 30 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...TGCGAACGAGCCTGGCAGAGCCTGGCGt........................................................................................................................................................................................................................... | 28 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................CTCTGAATATCTGGCATTGTGAGACTGC........................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................TGAATATCTGGCATTGTGAGACTGtgc...................................................................................................................... | 27 | tgc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TACGTGCTGAGCTATGTTCCGTTC............................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TACGTGCTGAGCTATGTTCCGTTCT.............................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................................................TCTGGCATTGTGAGACTGCGCCAACC................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................TACAATGAAGTCAAATCATGCAACAATTT.............. | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..TTGCGAACGAGCCTGGCAGAGCCTGGt............................................................................................................................................................................................................................. | 27 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ACTTGCGAACGAGCCTGGCAGAGCCTGGCGGAGGAGCCCGTGAGTGGCACGTACGTGCTGAGCTATGTTCCGTTCTGGATCCTTTTGGGGAGGAACTCGGGTCTCTGAATATCTGGCATTGTGAGACTGCGCCAACCACACACCTTGCTTTCCCTAAGGGATCCTCTTTGAGAGAGGCTGGTTGCTCATCCTGCACCCGTGAGACTGTACAATGAAGTCAAATCATGCAACAATTTGGAGGGACGCCACA ..............................................((((....)))).(((((..(((((.(((..((....))..))).)))))...)).)))........((((.............)))).................................................................................................................... ..............................................47.......................................................................................136................................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................................CGTGAGACTGTACAAagc...................................... | 18 | agc | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ......................CCTGGCGGAGGAGCCCGTGAGTGGCAa......................................................................................................................................................................................................... | 27 | a | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| .............................................................GCTATGTTCCGTTCTGGATCCTTTTGGGG................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................GCTGAGCTATGTTCCGTTCTGGATCC........................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |