| Gene: Rad52 | ID: uc009dmo.1_intron_9_0_chr6_119870209_f.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(3) PIWI.ip |
(2) PIWI.mut |
(19) TESTES |
| CCCTGTAACTGCAGCCTCAGAACTCCTCCAGGAGAAAGTCGTCTTTCCAGGTAATACAAGTGTTAAATTACTGTACTGTGTGCTTTTTGGAAGATACAGAATTCATATTAGTTTGGGGTGTCATGTGGCGTGTTGCGGATTGATCCCACCTTGCAATACTAGGCAAGTGCTGCTGTACCAGTGAGCTGCATCTCCAGCCTGTAGATTCCATCTTAAAGGAATCATAAAAGTCCTCACTTTCATTTGATTT .............................................................................................................((.((((((....(((..(((((((((((..((....))..)))))))))...((..((((....))))..))..))..))))))))).)).................................................. ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT4() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................TATTAGTTTGGGGTGTCATGTGGCGT....................................................................................................................... | 26 | 1 | 10.00 | 10.00 | 4.00 | 2.00 | - | 2.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................TATTAGTTTGGGGTGTCATGTGGCG........................................................................................................................ | 25 | 1 | 3.00 | 3.00 | - | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TGCTGTACCAGTGAGCTGCATCTCCAG..................................................... | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TCAGAACTCCTCCAGGAGAAAGTCGTC............................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............CTCAGAACTCCTCCAGGAGAAAGTCGTC............................................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................TACTGTACTGTGTGCTTTTTGGAAGA............................................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - |
| ................TCAGAACTCCTCCAGGAGAAAGTCGTCT.............................................................................................................................................................................................................. | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TCCTCCAGGAGAAAGTCGTCTTTCCAGa....................................................................................................................................................................................................... | 28 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .......................................................................................TGGAAGATACAGAATTCATATTAGTTTGGGa.................................................................................................................................... | 31 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....TAACTGCAGCCTCAGAACTCCTCCAt........................................................................................................................................................................................................................... | 26 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...........................................................................................................TTAGTTTGGGGTGTCATGTGGCGTGTT.................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............CCTCAGAACTCCTCCAGGAGAAAGTCGTC............................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............GCCTCAGAACTCCTCCAGGAGAAAGTCGTC............................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............AGCCTCAGAACTCCTCCAGGAGAAAGTC.................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................TGTACTGTGTGCTTTTTGGAAGATACA........................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................TACTAGGCAAGTGCTGCTGTACCAGT.................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TGCAATACTAGGCAAGTGCTGCTGTA......................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................GGCGTGTTGCGGAcccg........................................................................................................... | 17 | cccg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...........................................................................................................TTAGTTTGGGGTGTCATGTGGCGTG...................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................TGTTAAATTACTGTACTGTGTGCTTT.................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....................................................................TACTGTACTGTGTGCTTTTTGGAAGAT........................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................CAGAACTCCTCCAGGAGAAAGTCGTCTTTC........................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................TACAGAATTCATATTAGTTTGGGGTG.................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................TTTCCAGGTAATACAAGTGTTAA........................................................................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........TGCAGCCTCAGAACTCCTCCAGGAGAA...................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................AACTCCTCCAGGAGAAAGTCGTCTTTCC.......................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................TAGTTTGGGGTGTCATGTGGCGTGTTGC.................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........CAGCCTCAGAACTCCTCCAGGAGAAAGTC.................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................TTGGAAGATACAGAATTCATATTAGTTTG....................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................................................................................TCATGTGGCGTGTTGCGGATTGATCCC....................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TACAGAATTCATATTAGTTTGGGGTGT................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................ATTAGTTTGGGGTGTCATGTGGCGT....................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........TGCAGCCTCAGAACTCCTCCAGGAGAAAGT................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CCCTGTAACTGCAGCCTCAGAACTCCTCCAGGAGAAAGTCGTCTTTCCAGGTAATACAAGTGTTAAATTACTGTACTGTGTGCTTTTTGGAAGATACAGAATTCATATTAGTTTGGGGTGTCATGTGGCGTGTTGCGGATTGATCCCACCTTGCAATACTAGGCAAGTGCTGCTGTACCAGTGAGCTGCATCTCCAGCCTGTAGATTCCATCTTAAAGGAATCATAAAAGTCCTCACTTTCATTTGATTT .............................................................................................................((.((((((....(((..(((((((((((..((....))..)))))))))...((..((((....))))..))..))..))))))))).)).................................................. ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT4() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
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| ..........GCAGCCTCAGAACTCCTC.............................................................................................................................................................................................................................. | 18 | 1 | 8.00 | 8.00 | - | - | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |