| Gene: Brpf1 | ID: uc009dfb.1_intron_2_0_chr6_113265545_f.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(7) TESTES |
| CTGGGCTTGAACTCCATAGTCAGATGTGACCTTGAGCTTCTGGATCCTTTTACCCTCACCTCTAGGTTTCTGGGATCACGGTGTGAGCTACCATGCCTGATTTTCCAGACCTTTTTGATGAGCATCAATGCCCCCACTCATCCTAATTGAGGAGCTCTTCCTGGCAGTCAGGACCTAACAGGGTTTTATTTTGTTCCCAGGCTCAGTAAGATCACCAACCGCCTGACCATCCAGAGGAAGAGCCAGTTCA .........................................................................................................((((....))))..(((((.....((((...((((.......)))).......(((((.....))))).......)))).......)))))...................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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| .............................................................CTAGGTTTCTGGGATCACGGTGTGAGCTACCATGCCTGATTTTCCAGACCTT......................................................................................................................................... | 52 | 1 | 26.00 | 26.00 | 26.00 | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................TGACCATCCAGAGGAAGAGCCAGTTC. | 26 | 1 | 6.00 | 6.00 | - | 2.00 | 1.00 | 2.00 | 1.00 | - | - |
| ...........................................................................................................................................................................................................................CGCCTGACCATCCAGAGGAAGAGCCAGT... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - |
| ...............................................................................................................................................................................................................................TGACCATCCAGAGGAAGAGCCAGTTCA | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - |
| ................................TGAGCTTCTGGATCCT.......................................................................................................................................................................................................... | 16 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | 0.12 |
| CTGGGCTTGAACTCCATAGTCAGATGTGACCTTGAGCTTCTGGATCCTTTTACCCTCACCTCTAGGTTTCTGGGATCACGGTGTGAGCTACCATGCCTGATTTTCCAGACCTTTTTGATGAGCATCAATGCCCCCACTCATCCTAATTGAGGAGCTCTTCCTGGCAGTCAGGACCTAACAGGGTTTTATTTTGTTCCCAGGCTCAGTAAGATCACCAACCGCCTGACCATCCAGAGGAAGAGCCAGTTCA .........................................................................................................((((....))))..(((((.....((((...((((.......)))).......(((((.....))))).......)))).......)))))...................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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| ................................................................................GTGTGAGCTACCATGCCTGATTTTCC................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - |