| Gene: Srgap3 | ID: uc009deh.1_intron_5_0_chr6_112689105_r | SPECIES: mm9 |
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(4) OTHER.mut |
(1) PIWI.ip |
(15) TESTES |
| CCCCGCGTGGTCATTGTGGTCATGAGATACCTCTTTGCTTTCCTCAATCAGTGAGTACCTGGCCTGGGGAGCCCTCTGCCACTGGCCTCCTCTGGGCCAAGGCTCTTATGAATGCTATTTTATAAATCAGAATATAGAAACTTCTGCATTTGGGTTGTGTCCCCACTTCCCTCTCCCCCGCCCCCCGCAAAAAAAGGAAGGAAACTCTGGGGGAGGCTTTGCCTTGTGGGTGAACAGTGAGTATCTGTTCTCTCCTAGCCTTTCCCAGTACAGTGATGAGAACATGATGGATCCCTACAACTTGGCCA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT4() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
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| .......................................................................................................................................................................................................GGAAACTCTGGGGGAGG............................................................................................ | 17 | 2 | 11.00 | 11.00 | 3.50 | 1.50 | 1.00 | 3.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGGAAACTCTGGGGGAGG............................................................................................ | 18 | 1 | 9.00 | 9.00 | 3.00 | 3.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGAAACTCTGGGGGAGGt........................................................................................... | 18 | t | 6.50 | 11.00 | 0.50 | 1.00 | 1.00 | 1.50 | 1.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGGAAACTCTGGGGGAGGt........................................................................................... | 19 | t | 3.00 | 9.00 | 1.00 | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGGAAACTCTGGGGGA.............................................................................................. | 16 | 4 | 1.75 | 1.75 | 0.75 | - | 0.25 | 0.50 | - | 0.25 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGAAACTCTGGGGGAG............................................................................................. | 16 | 3 | 1.33 | 1.33 | - | - | - | - | 0.67 | 0.67 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGGAAACTCTGGGGGAGGtc.......................................................................................... | 20 | tc | 1.00 | 9.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGAAACTCTGGGGGAGGtccg........................................................................................ | 21 | tccg | 1.00 | 11.00 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| .......................................................................................................................................................................................................GGAAACTCTGGGGGAGGtc.......................................................................................... | 19 | tc | 1.00 | 11.00 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................ACAGTGATGAGAACATGATGGATCC.............. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGAAACTCTGGGGGAGGC........................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................TGGATCCCTACAACTTGGCC. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................TACAGTGATGAGAACATGATGGATC............... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................AAACTCTGGGGGAGGtcc......................................................................................... | 18 | tcc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................AAACTCTGGGGGAGGCTc......................................................................................... | 18 | c | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGGAAACTCTGGGGGAGGtccg........................................................................................ | 22 | tccg | 1.00 | 9.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................GTGATGAGAACATGATGGATCCC............. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .............................................................................................................................................................................................................................................................................ACAGTGATGAGAACATGATGGATCCCTACAAC....... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ......................................................................................................................................................................................................AGGAAACTCTGGGGGAGGtg.......................................................................................... | 20 | tg | 1.00 | 9.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................................................................................................................................................................................................................................................................TACAGTGATGAGAACATGATGGATCCC............. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................GAAACTCTGGGGGAGGtccg........................................................................................ | 20 | tccg | 0.60 | 0.20 | - | - | 0.20 | 0.40 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGAAACTCTGGGGGAGGtcc......................................................................................... | 20 | tcc | 0.50 | 11.00 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGGAAACTCTGGGGGAG............................................................................................. | 17 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGAAACTCTGGGGGA.............................................................................................. | 15 | 15 | 0.40 | 0.40 | - | - | 0.07 | - | - | 0.13 | - | - | 0.07 | 0.07 | - | - | - | - | 0.07 |
| ........................................................................................................................................................................................................GAAACTCTGGGGGAGG............................................................................................ | 16 | 5 | 0.20 | 0.20 | - | - | - | - | - | 0.20 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGGAAACTCTGGGGG............................................................................................... | 15 | 17 | 0.12 | 0.12 | 0.06 | - | - | - | - | 0.06 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................GAAACTCTGGGGGAG............................................................................................. | 15 | 10 | 0.10 | 0.10 | - | - | - | - | - | 0.10 | - | - | - | - | - | - | - | - | - |
| CCCCGCGTGGTCATTGTGGTCATGAGATACCTCTTTGCTTTCCTCAATCAGTGAGTACCTGGCCTGGGGAGCCCTCTGCCACTGGCCTCCTCTGGGCCAAGGCTCTTATGAATGCTATTTTATAAATCAGAATATAGAAACTTCTGCATTTGGGTTGTGTCCCCACTTCCCTCTCCCCCGCCCCCCGCAAAAAAAGGAAGGAAACTCTGGGGGAGGCTTTGCCTTGTGGGTGAACAGTGAGTATCTGTTCTCTCCTAGCCTTTCCCAGTACAGTGATGAGAACATGATGGATCCCTACAACTTGGCCA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT4() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
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