| Gene: Itpr1 | ID: uc009ddh.1_intron_49_0_chr6_108438603_f.3p | SPECIES: mm9 |
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(6) OTHER.mut |
(2) PIWI.ip |
(16) TESTES |
| AAAAAGCCCTGGTTGCAGTGGTGTACATCAATAAAACCAGAATTCTGGAGGAAGAAGCAGGAGAATGGAAAGGTTAAGGTCATCCTCAGCTACATCACAAGGTCAAGGCCAGCCCGAGATACATGAGAAAGAAAGAAACCTGGAGTTTAAAGTAGCTCTTGTAATCCTTGACTCCCAGTTTCTCTCTGCTTGTGGTCTAGTTGGCTCGGCATAACAAAGAACTTCAAACCATGCTGAAACCTGGAGGCCA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................................................TTGACTCCCAGTTTCTCTCTGC............................................................. | 22 | 1 | 33.00 | 33.00 | 13.00 | 9.00 | 4.00 | 1.00 | 3.00 | - | - | - | 1.00 | - | - | - | 1.00 | 1.00 | - | - |
| ...................................................................................................................................................................................TTCTCTCTGCTTGTGGTCTAG.................................................. | 21 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................TTGACTCCCAGTTTCTCTCTGCa............................................................ | 23 | a | 2.00 | 33.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................TGACTCCCAGTTTCTCTCTGCT............................................................ | 22 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................TGACTCCCAGTTTCTCTCTGC............................................................. | 21 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .................................................................................................................................AGAAAGAAACCTGGAGTTTAAAGT................................................................................................. | 24 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................................................................................................TTGACTCCCAGTTTCTCTC................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................AAGAAAGAAACCTGGAGTTTAAAG.................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................TTGACTCCCAGTTTCTCTCTGt............................................................. | 22 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................ACAAAGAACTTCAAACCATGCTG.............. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................................................................................................................................................................................................TAACAAAGAACTTCAAACCATGCTGAAACC......... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................................................................................AAGAAAGAAACCTGGAGTTTA..................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................CTGGAGTTTAAAGTAGa.............................................................................................. | 17 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................AGAACTTCAAACCATGCTG.............. | 19 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................AACAAAGAACTTCAAACC.................... | 18 | 3 | 0.33 | 0.33 | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - |
| AAAAAGCCCTGGTTGCAGTGGTGTACATCAATAAAACCAGAATTCTGGAGGAAGAAGCAGGAGAATGGAAAGGTTAAGGTCATCCTCAGCTACATCACAAGGTCAAGGCCAGCCCGAGATACATGAGAAAGAAAGAAACCTGGAGTTTAAAGTAGCTCTTGTAATCCTTGACTCCCAGTTTCTCTCTGCTTGTGGTCTAGTTGGCTCGGCATAACAAAGAACTTCAAACCATGCTGAAACCTGGAGGCCA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......GTTGCAGTGGTGTtcca.................................................................................................................................................................................................................................. | 17 | tcca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |