| Gene: Chl1 | ID: uc009dck.1_intron_24_0_chr6_103667626_f.5p | SPECIES: mm9 |
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(1) OTHER.mut |
(1) OVARY |
(2) PIWI.ip |
(5) TESTES |
| CCAGATCCAGAAGTTCAGTCAGCAAAAGATGAAACTTTTGGTGAATACAGGTAAGTGTAGCTTTATATACTGTGATCAGTTTGGAACATTTTCATCATGTTTGTCAAGTGAAGAAAATGCTTTGCTCTCTGGTAACTTGTGAGGTCACTTAAGTATACTCTAATACCATCTGCAAATAGTGGTATCTTGACTTCTTCCTTTCCAATTTGTATCCCTTTCACCTCCTTTTGTTGTCTAATTTCTCTAGCTA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR014236(GSM319960) 10 dpp total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTAAGTGTAGCTTTATATACTGTGATCAGTTTGGAACATTTTCATCATGTTT.................................................................................................................................................... | 52 | 1 | 45.00 | 45.00 | 45.00 | - | - | - | - | - |
| ........................................................................................................................................................................................TCTTGACTTCTTCCTagt................................................ | 18 | agt | 1.00 | 0.00 | - | - | - | 1.00 | - | - |
| CCAGATCCAGAAGTTCAGTCAGCAAAAGATGAAACTTTTGGTGAATACAGGTAAGTGTAGCTTTATATACTGTGATCAGTTTGGAACATTTTCATCATGTTTGTCAAGTGAAGAAAATGCTTTGCTCTCTGGTAACTTGTGAGGTCACTTAAGTATACTCTAATACCATCTGCAAATAGTGGTATCTTGACTTCTTCCTTTCCAATTTGTATCCCTTTCACCTCCTTTTGTTGTCTAATTTCTCTAGCTA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR014236(GSM319960) 10 dpp total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................................................GACTTCTTCCTTTCCAATTTGTAgtt....................................... | 26 | gtt | 1.00 | 0.00 | - | - | - | - | 1.00 | - |
| ......................................................................................................................................................................................TTGACTTCTTCCTTTCCAATTTGTAccta....................................... | 29 | ccta | 1.00 | 0.00 | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................................................................CAATTTGTATCCCTTTCACCTCCTTt....................... | 26 | t | 1.00 | 0.00 | - | - | 1.00 | - | - | - |
| .................................................................................................................................................................................................................TATCCCTTTCACCTCCTTTTGTTGTCTA............. | 28 | 5 | 0.20 | 0.20 | - | 0.20 | - | - | - | - |
| ...............................................................................................................................................................................................................TGTATCCCTTTCACCTCCTTTTGTTGTC............... | 28 | 6 | 0.17 | 0.17 | - | - | 0.17 | - | - | - |
| ....................................................................................................................................................................................................................CCCTTTCACCTCCTTTTGTTGTCTAA............ | 26 | 7 | 0.14 | 0.14 | - | - | - | - | - | 0.14 |