| Gene: AK009724 | ID: uc009csa.1_intron_0_0_chr6_86433712_r.5p | SPECIES: mm9 |
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(6) OTHER.mut |
(1) OVARY |
(2) PIWI.ip |
(1) PIWI.mut |
(18) TESTES |
| AACAAAGGGATTGGGACACCGGTGGCCTCCGTCCTCACTAAAGCTACTTGGTAAGAGCTAAGAGCAGAAGGCAGGGGGCAGAGTGCCCGCCTGCAAACTAAAGTAAACACCACAACTTCGTGTGGTGTGCCTGAGAAACTGGATGGTGTGTGAGCTATATCACTGTGTGATGTGCGCCTGCAGGCAGTGTTTGTGTGTGTACTCTGTTGTGGGGCCTCACGGAGGGTGTGCAGGCACTGCATGTTTGCCA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................................TGTGTGTGTACTCTGTTGTGGGGC................................... | 24 | 1 | 10.00 | 10.00 | 10.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TAAGAGCTAAGAGCAGAAGGCAGG............................................................................................................................................................................... | 24 | 1 | 9.00 | 9.00 | - | 2.00 | - | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TGGTAAGAGCTAAGAGCAGAAGGCAGG............................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................TATCACTGTGTGATGTGCGCCTGCAGG.................................................................. | 27 | 1 | 3.00 | 3.00 | - | - | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................TAAGAGCTAAGAGCAGAAGGCAGGG.............................................................................................................................................................................. | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................................................................................................................TGAGAAACTGGATGGTGTGTGAGCT.............................................................................................. | 25 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................TGAGAAACTGGATGGTGTGTGAGCTA............................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...........................................................................................................................................................................................TGTTTGTGTGTGTACTCTGTTGTGGG..................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................................................................................................AAACTGGATGGTGTGTGA................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...........................................................................................................................................TGGATGGTGTGTGAGCTATATCAC....................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................................................................................................................................................GTGAGCTATATCACTGTG................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............ACACCGGTGGCgaag............................................................................................................................................................................................................................ | 15 | gaag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .............................................................................................................................................................TATCACTGTGTGATGTGCGC......................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TGGTAAGAGCTAAGAGCAGAAGG................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TGGTAAGAGCTAAGAGCAGAAGGCAG................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................TGAGAAACTGGATGGTGTGTGAGC............................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TAAGAGCTAAGAGCAGAAGGCAGGGG............................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................CCTGAGAAACTGGATGGTGTGTGAGC............................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................TAAAGCTACTTGGTAAGAGCTAAGAGCA........................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................TGTGTGTACTCTGTTGTGGG..................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................TACTTGGTAAGAGCTAAGAGCAGAAGGCA................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| AACAAAGGGATTGGGACACCGGTGGCCTCCGTCCTCACTAAAGCTACTTGGTAAGAGCTAAGAGCAGAAGGCAGGGGGCAGAGTGCCCGCCTGCAAACTAAAGTAAACACCACAACTTCGTGTGGTGTGCCTGAGAAACTGGATGGTGTGTGAGCTATATCACTGTGTGATGTGCGCCTGCAGGCAGTGTTTGTGTGTGTACTCTGTTGTGGGGCCTCACGGAGGGTGTGCAGGCACTGCATGTTTGCCA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................................................................AGGGTGTGCAGGCACTGCATGTTTGCCA | 28 | 1 | 3.00 | 3.00 | - | - | - | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................GCCTGCAAACTAAAGTAAACACCACA........................................................................................................................................ | 26 | 1 | 3.00 | 3.00 | - | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................GCCCGCCTGCAAACTAAAGTAAACACCA.......................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................GTCCTCACTAAAGCTACTTGGTAAGAGCTAA............................................................................................................................................................................................. | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................GAGCTAAGAGCAGAAGGCAGGGGGCA.......................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................................................................................................................GTGTGCCTGAGAAACTGGAT.......................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................CAGGCACTGCATGTTTGCCA | 20 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................CTCCGTCCTCACTAAAGCTACTTGGTA..................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............ACACCGGTGGCCTCCGTCCTCACTAa.................................................................................................................................................................................................................. | 26 | a | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................CCTCACTAAAGCTACTTGGTAAGAGCTAA............................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................CCGTCCTCACTAAAGCTACTTGGTA..................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |