| Gene: Sfxn5 | ID: uc009cpj.1_intron_0_0_chr6_85165741_r.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) PIWI.ip |
(2) PIWI.mut |
(11) TESTES |
| CAATGAGGGAAACCCAGAATGTAGACAAGAAAGAGGCTAATCGTGAGCTGATAGAAGAGAAAGCACGCATATCTCTTGCTAGGACATAGAGGTACCGGCTAGGGGACATGCAGAGGAAAAGAACTGTAGGTACCAGGTCAGGCCTTAGAGCCACTGCCCTGGCACTCCCCAGCTCTGCACTCTTCTCTTTCTCTCCTCAGATTGAAACCTCCCAATTGGAGCCTGAGATAGCCCGGGCTACCAGCAGCCG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................TAGGACATAGAGGTACCGGCTAGGG.................................................................................................................................................. | 25 | 1 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - |
| ...........ACCCAGAATGTAGACAAGAAAGAGGCT.................................................................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................TCGTGAGCTGATAGAAGAGAAAGCACG....................................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................TAGGACATAGAGGTACCGGCTAGGGGAC............................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................TGAGCTGATAGAAGAGAAAGCACGCATA................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ............................................................................TGCTAGGACATAGAGGTACCGGCTAGG................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 |
| ........................................................................................................GACATGCAGAGGAAAAGAACTGTAGG........................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................GAGGAAAAGAACTGTAGGTACCAGGTC............................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..............................................................................................................CAGAGGAAAAGAACTGTAGGTACCAG.................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................TATCTCTTGCTAGGACATAGAGGTA............................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..........................................................................................................CATGCAGAGGAAAAGAACTGTAGGTAC..................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................................................ACATGCAGAGGAAAAGAACTGTAGGTA...................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................TAGGACATAGAGGTACCGGCTAGGGGA................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................................................................................................TGCAGAGGAAAAGAACTGTAGGTAC..................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................................................................................................................................................................................TGAAACCTCCCAATTGGAGCCTGAGA...................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................TCGTGAGCTGATAGAAGAGAAAGCACGC...................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........AACCCAGAATGTAGACAAGAAAGAGGCTAATC................................................................................................................................................................................................................ | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ........................................TCGTGAGCTGATAGAAGAGAAAGCAC........................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................AAGAACTGTAGGTACCAGGTCAGGCC.......................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................TGAGCTGATAGAAGAGAAAGCACGCA..................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................................................................AAGAACTGTAGGTACCAGGTCAGGC........................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................TCTCTTGCTAGGACATAGAGGTACCGGC....................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| CAATGAGGGAAACCCAGAATGTAGACAAGAAAGAGGCTAATCGTGAGCTGATAGAAGAGAAAGCACGCATATCTCTTGCTAGGACATAGAGGTACCGGCTAGGGGACATGCAGAGGAAAAGAACTGTAGGTACCAGGTCAGGCCTTAGAGCCACTGCCCTGGCACTCCCCAGCTCTGCACTCTTCTCTTTCTCTCCTCAGATTGAAACCTCCCAATTGGAGCCTGAGATAGCCCGGGCTACCAGCAGCCG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
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