| Gene: AK140479 | ID: uc009cji.1_intron_0_0_chr6_73034881_r.3p | SPECIES: mm9 |
|
|
(6) OTHER.mut |
(6) PIWI.ip |
(1) PIWI.mut |
(23) TESTES |
| TTGGTGAAACATTTAGTTTCAGATTCAGATTTTCCTTACTAAGGATGCTCCTGAGGGTCTATAGCTGCACCACCCTGAATGTGCCCAGTCTTGTCTGATCTTGGAAGCTAAGCAGAGTTGGGCCTGGTTAGTACTTTGATGGGAGACAAGGATGCTCAGCCTTAATGAGACCTCTTAAGCAACCTTGATTCTGTGGTTAGGTCCGTAATGTTGTGCAAGAAGATGAAGCAATAGCAAAGGTGAAAGCTGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................GGTTAGTACTTTGcg.............................................................................................................. | 15 | cg | 24.00 | 0.00 | - | - | - | 17.00 | - | - | - | - | - | - | 3.00 | - | 3.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................GTTAGTACTTTGATGGGAGACc...................................................................................................... | 22 | c | 11.00 | 8.00 | 2.00 | 6.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................GTTAGTACTTTGATGGGAG......................................................................................................... | 19 | 1 | 11.00 | 11.00 | - | 3.00 | 3.00 | - | 2.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................GTTAGTACTTTGATGGGAGACcg..................................................................................................... | 23 | cg | 11.00 | 8.00 | 6.00 | - | 2.00 | - | 1.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................GTTAGTACTTTGATGGGAGACcgc.................................................................................................... | 24 | cgc | 10.00 | 8.00 | - | 1.00 | 6.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................GGTTAGTACTTTGcgt............................................................................................................. | 16 | cgt | 8.00 | 0.00 | - | - | - | 4.00 | - | - | - | - | - | - | 3.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................GTTAGTACTTTGATGGGAGAC....................................................................................................... | 21 | 1 | 8.00 | 8.00 | 1.00 | 1.00 | 2.00 | - | 1.00 | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................TCTGATCTTGGAAGCTAAGC......................................................................................................................................... | 20 | 12 | 7.00 | 7.00 | 0.50 | 1.42 | 0.50 | - | 0.67 | 2.17 | 0.58 | 0.92 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................GTTAGTACTTTGATGGGA.......................................................................................................... | 18 | 1 | 7.00 | 7.00 | 4.00 | 1.00 | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................GTTAGTACTTTGATGGGAGA........................................................................................................ | 20 | 1 | 7.00 | 7.00 | 6.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TGGTTAGTACTTTGATGGGAGACcgcc................................................................................................... | 27 | cgcc | 6.00 | 3.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | 3.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................................................................................................................TGGTTAGTACTTTGcg.............................................................................................................. | 16 | cg | 5.00 | 0.00 | - | - | - | 3.00 | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................GTTAGTACTTTGATGGG........................................................................................................... | 17 | 1 | 5.00 | 5.00 | 1.00 | 1.00 | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................TCTGATCTTGGAAGCTAAGCA........................................................................................................................................ | 21 | 12 | 4.58 | 4.58 | 0.83 | 0.75 | 0.67 | - | 0.17 | 1.00 | 0.08 | 0.67 | 0.33 | - | - | - | - | 0.08 | - | - | - | - | - | - | - | - | - |
| .............................................................................................TCTGATCTTGGAAGCTAAGCAG....................................................................................................................................... | 22 | 11 | 4.55 | 4.55 | 0.64 | 1.27 | 0.64 | - | 0.73 | 0.73 | 0.45 | - | 0.09 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................TCTTGGAAGCTAAGCAGgga.................................................................................................................................... | 20 | gga | 4.00 | 0.00 | - | - | - | - | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TGGTTAGTACTTTGATGG............................................................................................................ | 18 | 1 | 4.00 | 4.00 | - | 1.00 | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................CTGGTTAGTACTTTGATGGGA.......................................................................................................... | 21 | 1 | 4.00 | 4.00 | - | - | - | - | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TGGTTAGTACTTTGATGGGAGACcgc.................................................................................................... | 26 | cgc | 4.00 | 3.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................TAGTACTTTGATGGGAGA........................................................................................................ | 18 | 2 | 3.50 | 3.50 | 0.50 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GTCTGATCTTGGAAGCTAAGCAG....................................................................................................................................... | 23 | 4 | 3.25 | 3.25 | 0.25 | 2.00 | 0.25 | - | - | 0.50 | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................GGTTAGTACTTTGATGGGA.......................................................................................................... | 19 | 1 | 3.00 | 3.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TGGTTAGTACTTTGcgt............................................................................................................. | 17 | cgt | 3.00 | 0.00 | - | - | - | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TGGTTAGTACTTTGATGGGAGAC....................................................................................................... | 23 | 1 | 3.00 | 3.00 | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................GTTAGTACTTTGATGGGAGACcgcc................................................................................................... | 25 | cgcc | 3.00 | 8.00 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GTCTGATCTTGGAAGCTAAGC......................................................................................................................................... | 21 | 5 | 2.40 | 2.40 | - | 1.20 | 0.40 | - | 0.60 | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................CTTGTCTGATCTTGGAAGCTAAGCA........................................................................................................................................ | 25 | 4 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TTAGTACTTTGATGGGAGACcgc.................................................................................................... | 23 | cgc | 2.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................GGGCCTGGTTAGTACTTggt............................................................................................................... | 20 | ggt | 2.00 | 0.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................CTGGTTAGTACTTTGtagg............................................................................................................ | 19 | tagg | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TGGTTAGTACTTTGATGGGAGACAAG.................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................GGTTAGTACTTTGcgtt............................................................................................................ | 17 | cgtt | 2.00 | 0.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TGTCTGATCTTGGAAGCTAAGCAGAGT.................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................................................................................GCCTGGTTAGTACTTTGATGG............................................................................................................ | 21 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................TCTGATCTTGGAAGCTAAG.......................................................................................................................................... | 19 | 15 | 1.40 | 1.40 | 0.13 | 0.13 | 0.33 | - | 0.47 | 0.07 | 0.13 | - | 0.13 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................TTGGGCCTGGTTAGTAC.................................................................................................................... | 17 | 12 | 1.33 | 1.33 | 0.08 | 0.08 | - | - | 0.25 | - | 0.25 | 0.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................TGGGCCTGGTTAGTACT................................................................................................................... | 17 | 11 | 1.18 | 1.18 | - | 0.18 | 0.36 | - | 0.45 | 0.09 | - | - | 0.09 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GTCTGATCTTGGAAGCTAAG.......................................................................................................................................... | 20 | 8 | 1.12 | 1.12 | 1.00 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................CTGATCTTGGAAGCTAAGCA........................................................................................................................................ | 20 | 14 | 1.07 | 1.07 | 0.07 | 0.36 | - | - | - | 0.57 | - | - | 0.07 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGGAAGCTAAGCAGAGTTGGGCCTGGTg......................................................................................................................... | 28 | g | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................GGGCCTGGTTAGTACTTgt................................................................................................................ | 19 | gt | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................TTTGATGGGAGACAAGGATGCTCAGC.......................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................GTCTGATCTTGGAAGCTAAGCA........................................................................................................................................ | 22 | 5 | 1.00 | 1.00 | 0.20 | 0.20 | - | - | - | 0.20 | - | - | 0.40 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................GTTGGGCCTGGTTAGTACT................................................................................................................... | 19 | 8 | 1.00 | 1.00 | 0.12 | - | - | - | 0.62 | - | 0.12 | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................GTACTTTGATGGGAGACAAGGATGCTC............................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................AGCAGAGTTGGGCCgccg.......................................................................................................................... | 18 | gccg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ............................................................................................................................TGGTTAGTACTTTGcgtt............................................................................................................ | 18 | cgtt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................GGGCCTGGTTAGTACTTggag.............................................................................................................. | 21 | ggag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................AGTACTTTGATGGGAGA........................................................................................................ | 17 | 3 | 1.00 | 1.00 | 0.67 | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TGGTTAGTACTTTGATGGGAG......................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................CTGGTTAGTACTTTGATGGG........................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................TAGTACTTTGATGGGAGACc...................................................................................................... | 20 | c | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................GGGCCTGGTTAGTACTTgcga.............................................................................................................. | 21 | gcga | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TGGTTAGTACTTTGATGGGAGACAAGG................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................GGCCTGGTTAGTACTTTGATGGGA.......................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................GGTTAGTACTTTGATGGGAGAC....................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................CTGGTTAGTACTTTGATGGGAGA........................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................AGTACTTTGATGGGAGACcgc.................................................................................................... | 21 | cgc | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................CTGGTTAGTACTTTGATGGGAG......................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TTAGTACTTTGATGGGAG......................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TGGTTAGTACTTTGATGGGA.......................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TTAGTACTTTGATGGGAGACcgcc................................................................................................... | 24 | cgcc | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................GCCTGGTTAGTACTTTGATGGGAG......................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................AGCAATAGCAAAGGTGAAAG.... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................................................................GGGCCTGGTTAGTACTggga............................................................................................................... | 20 | ggga | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................TACTTTGATGGGAGACc...................................................................................................... | 17 | c | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................ACTTTGATGGGAGACcgc.................................................................................................... | 18 | cgc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................................................................................................................................................GTTGTGCAAGAAGATGAAGC..................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..............................................................................................................................GTTAGTACTTTGATGG............................................................................................................ | 16 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................TGGGCCTGGTTAGTACTTTGATGGGAGA........................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .............................................................................................................................GGTTAGTACTTTGATGGGAGACcgc.................................................................................................... | 25 | cgc | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................GGGCCTGGTTAGTACTTTGAT.............................................................................................................. | 21 | 2 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................GGGCCTGGTTAGTACTTTGATGG............................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................TAGTACTTTGATGGGAGACcgc.................................................................................................... | 22 | cgc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................................GTACTTTGATGGGAGACc...................................................................................................... | 18 | c | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................TGAAGCAATAGCAAAGGTGAAAGCTGA | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................GGGCCTGGTTAGTACTc.................................................................................................................. | 17 | c | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TTAGTACTTTGATGGGAGACc...................................................................................................... | 21 | c | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................AGTACTTTGATGGGAGAC....................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................GGTTAGTACTTTGATGGGAG......................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGGAAGCTAAGCAGAGTTGGGCCTGGTT......................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................CCTGGTTAGTACTTTGATGGGAGACcgc.................................................................................................... | 28 | cgc | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................GGGCCTGGTTAGTACTctgg............................................................................................................... | 20 | ctgg | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TGGTTAGTACTTTGATGGGAGACc...................................................................................................... | 24 | c | 1.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TTAGTACTTTGATGGGA.......................................................................................................... | 17 | 3 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................CTGATCTTGGAAGCTAAGC......................................................................................................................................... | 19 | 14 | 0.93 | 0.93 | - | 0.36 | 0.07 | - | 0.07 | 0.29 | 0.07 | 0.07 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................TTGGGCCTGGTTAGTACT................................................................................................................... | 18 | 11 | 0.91 | 0.91 | - | 0.36 | - | - | 0.36 | - | 0.18 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................TGGGCCTGGTTAGTACTT.................................................................................................................. | 18 | 10 | 0.80 | 0.80 | - | - | - | - | 0.60 | - | 0.10 | - | 0.10 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................CTGATCTTGGAAGCTAAGCAG....................................................................................................................................... | 21 | 13 | 0.69 | 0.69 | 0.08 | 0.31 | - | - | 0.08 | 0.23 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................TCTTGTCTGATCTTGGAAGCTAAGCA........................................................................................................................................ | 26 | 4 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................GGGCCTGGTTAGTACTTTG................................................................................................................ | 19 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................GGGCCTGGTTAGTACTTT................................................................................................................. | 18 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................GTTGGGCCTGGTTAG....................................................................................................................... | 15 | 18 | 0.50 | 0.50 | - | - | 0.39 | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................TAGTACTTTGATGGGAG......................................................................................................... | 17 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GTCTGATCTTGGAAGCTAA........................................................................................................................................... | 19 | 10 | 0.40 | 0.40 | - | - | - | - | - | 0.40 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................CTTGTCTGATCTTGGAAGCTAAGCAG....................................................................................................................................... | 26 | 3 | 0.33 | 0.33 | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................GGCCTGGTTAGTACTTTGA............................................................................................................... | 19 | 3 | 0.33 | 0.33 | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................GTACTTTGATGGGAGA........................................................................................................ | 16 | 3 | 0.33 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................GTTGGGCCTGGTTAGTAC.................................................................................................................... | 18 | 9 | 0.33 | 0.33 | 0.22 | - | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................TTGGGCCTGGTTAGTACTT.................................................................................................................. | 19 | 10 | 0.30 | 0.30 | - | - | - | - | 0.20 | - | 0.10 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................GTTGGGCCTGGTTAGTA..................................................................................................................... | 17 | 11 | 0.27 | 0.27 | - | - | - | - | 0.27 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................TAGTACTTTGATGGGA.......................................................................................................... | 16 | 4 | 0.25 | 0.25 | - | - | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GTCTGATCTTGGAAGCTAAGCAGggac................................................................................................................................... | 27 | ggac | 0.25 | 3.25 | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GTCTGATCTTGGAAGCTAAGCAGggtt................................................................................................................................... | 27 | ggtt | 0.25 | 3.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - | - | - | - | - | - |
| ..........................................................................................................................CCTGGTTAGTACTTTGA............................................................................................................... | 17 | 4 | 0.25 | 0.25 | - | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GTCTGATCTTGGAAGC.............................................................................................................................................. | 16 | 14 | 0.21 | 0.21 | - | - | - | - | - | 0.14 | 0.07 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GTCTGATCTTGGAAGCTA............................................................................................................................................ | 18 | 10 | 0.20 | 0.20 | 0.10 | - | - | - | 0.10 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GTCTGATCTTGGAAGCTAAGCAt....................................................................................................................................... | 23 | t | 0.20 | 1.00 | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................TCTGATCTTGGAAGCTAAGCAGggac................................................................................................................................... | 26 | ggac | 0.18 | 4.55 | - | - | - | - | - | 0.09 | - | - | - | - | - | - | - | - | - | - | - | 0.09 | - | - | - | - | - |
| ..............................................................................................CTGATCTTGGAAGCTAAG.......................................................................................................................................... | 18 | 17 | 0.18 | 0.18 | 0.06 | - | 0.06 | - | 0.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................TGGGCCTGGTTAGTAC.................................................................................................................... | 16 | 12 | 0.17 | 0.17 | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................GTTGGGCCTGGTTAGTACTT.................................................................................................................. | 20 | 7 | 0.14 | 0.14 | - | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................TCTGATCTTGGAAGCTAA........................................................................................................................................... | 18 | 17 | 0.12 | 0.12 | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................TCTGATCTTGGAAGCTAAGCAGt...................................................................................................................................... | 23 | t | 0.09 | 4.55 | - | - | - | - | - | - | - | - | 0.09 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................TCTGATCTTGGAAGCTAAa.......................................................................................................................................... | 19 | a | 0.06 | 0.12 | - | - | - | - | 0.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TTGGTGAAACATTTAGTTTCAGATTCAGATTTTCCTTACTAAGGATGCTCCTGAGGGTCTATAGCTGCACCACCCTGAATGTGCCCAGTCTTGTCTGATCTTGGAAGCTAAGCAGAGTTGGGCCTGGTTAGTACTTTGATGGGAGACAAGGATGCTCAGCCTTAATGAGACCTCTTAAGCAACCTTGATTCTGTGGTTAGGTCCGTAATGTTGTGCAAGAAGATGAAGCAATAGCAAAGGTGAAAGCTGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) |
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