(6)
OTHER.mut
(5)
PIWI.ip
(1)
PIWI.mut
(26)
TESTES

Sense strand
CTGCAAGATGGCGGCTTCCATCTTCACGGGCGCCGTGAGAGCTGCCTCAGGTCAGTGTTCTATTGACAGCTTCACTGAGAAGAGGGTCGGCGCGGGAGGGAGTGGGAATTTAGTTTGGATGTTAACGAGGAAAGAAAAACAAGATGACTTGAGGTCGGAGGTTTGCTGCGCGATACCTTGCACAGTGTAGTGCCCATGACCCGCGTTCACTGGATCCACCCTGCCCTAGGAAGCACACCCGAGACTGAGG
.............................................................................................................................((.((......((((....((((.....))))...)))).)).))................................................................................
.........................................................................................................106..............................................................171.............................................................................
Size Perfect hit Total Norm Perfect Norm SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
..............................................................................................................TAGTTTGGATGTTAACGAGGAAAGAAA................................................................................................................. 27 1 10.00 10.00 5.00 2.00 - - - - - - 1.00 - - - - - 1.00 - - - - 1.00 - - - - - -
.....................................................................................................................................................TGAGGTCGGAGGTTgtat................................................................................... 18 gtat 7.00 0.00 - - - 5.00 - - - - - - - - - 1.00 - - - - - - 1.00 - - - - -
.......................................................................................................................TGTTAACGAGGAAAGAAAAACAAGATGACT..................................................................................................... 30 1 5.00 5.00 4.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................TAGTTTGGATGTTAACGAGGAAAGAAAAA............................................................................................................... 29 1 5.00 5.00 1.00 3.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - -
..................................................................................................................................................................................TGCACAGTGTAGTGCCCATGACCCGCGT............................................ 28 1 3.00 3.00 1.00 - - - - 1.00 - 1.00 - - - - - - - - - - - - - - - - - -
.......................................................................................................................TGTTAACGAGGAAAGAAAAACAAGATGAC...................................................................................................... 29 1 3.00 3.00 - 2.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................TGTTAACGAGGAAAGAAAAACAAGATG........................................................................................................ 27 1 2.00 2.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................TAGGAAGCACACCCGAGACTGAGGaat 27 aat 2.00 0.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................TGTTAACGAGGAAAGAAAAACAAGATGt....................................................................................................... 28 t 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................TGTTAACGAGGAAAGAAAAACAAGATGA....................................................................................................... 28 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................TAGTTTGGATGTTAACGAGGAAAGAAAAAC.............................................................................................................. 30 1 2.00 2.00 - - - - - - - - - - - - - - - 1.00 - 1.00 - - - - - - - -
.................................................................................................................TTTGGATGTTAACGAGGAAAGAAAAACA............................................................................................................. 28 1 2.00 2.00 - - - - - - - 1.00 - - - - - - - - - - - - 1.00 - - - - -
..........................CGGGCGCCGTGAGAGCTGC............................................................................................................................................................................................................. 19 1 2.00 2.00 - - - - - - - - 2.00 - - - - - - - - - - - - - - - - -
........TGGCGGCTTCCATCTctga............................................................................................................................................................................................................................... 19 ctga 2.00 0.00 - - - - - - 2.00 - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................TGAGGTCGGAGGTTTGCTGCGCGATA........................................................................... 26 1 2.00 2.00 - - - - - - - 1.00 - - - - - - - 1.00 - - - - - - - - - -
.....................................................................................................................................................TGAGGTCGGAGGTTgtag................................................................................... 18 gtag 2.00 0.00 - - - - - - - - - - - - - - - - - 2.00 - - - - - - - -
......................................................................................................................................................................TGCGCGATACCTTGCACAGTGTAGTGCCC....................................................... 29 1 2.00 2.00 - - - - - - - - - 2.00 - - - - - - - - - - - - - - - -
....................TCTTCACGGGCGCCGTGAGAGCTGCC............................................................................................................................................................................................................ 26 1 2.00 2.00 - - - - - - - - - - 1.00 - - - - - 1.00 - - - - - - - - -
.....................................................................CTTCACTGAGAAGAGGGTCGGCGCGG........................................................................................................................................................... 26 1 2.00 2.00 - 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................TAACGAGGAAAGAAAAACAAGATGACTTG................................................................................................... 29 1 2.00 2.00 - - 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - -
..............................................................................................................................................GATGACTTGAGGTCGGAGGTTTGCTGt................................................................................. 27 t 2.00 0.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
.............................................................................................................TTAGTTTGGATGTTAACGAGGAAAGAA.................................................................................................................. 27 1 2.00 2.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
.....................................................................................................................................................TGAGGTCGGAGGTTTGCTGCGCGATAC.......................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
....................................................................................................................................AGAAAAACAAGATGACTTGAGGTCGGA........................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
..................................................................................................................TTGGATGTTAACGAGGAAAGAAAAACA............................................................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..................................................................................................................TTGGATGTTAACGAGGAAAGAAAAA............................................................................................................... 25 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
................................................................................................................................................TGACTTGAGGTCGGAGGTTTGCTGCaa............................................................................... 27 aa 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
................TCCATCTTCACGGGgcca........................................................................................................................................................................................................................ 18 gcca 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
.........................................................................................................................TTAACGAGGAAAGAAAAACAAGATGACTT.................................................................................................... 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................TGAGGTCGGAGGTTgtaa................................................................................... 18 gtaa 1.00 0.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
.............................................................................................................TTAGTTTGGATGTTAACGAGGAAAGA................................................................................................................... 26 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
......................................................................................................TGGGAATTTAGTTTGGATGTTAACGAGG........................................................................................................................ 28 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
............................................................................................................................................AAGATGACTTGAGGTCGGAGGTTTGC.................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................GGATGTTAACGAGGAAAGAAAAACAAGA.......................................................................................................... 28 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................GACTTGAGGTCGGAGGTTTGC.................................................................................... 21 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
..........................................................................................................................TAACGAGGAAAGAAAAACAAGATGACTTGAG................................................................................................. 31 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................GTGGGAATTTAGTTTGGAT.................................................................................................................................. 19 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................TGACCCGCGTTCACTGGATCCACCCTGC.......................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
...................................................................AGCTTCACTGAGAAGAGGGTCGGCGCG............................................................................................................................................................ 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................TGACTTGAGGTCGGAGGTTTGCTGC................................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
.............................................................................................................TTAGTTTGGATGTTAACGAGGAAA..................................................................................................................... 24 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00
.....................................................................................................................................................TGAGGTCGGAGGTTgcag................................................................................... 18 gcag 1.00 0.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...............................................................................................................................................ATGACTTGAGGTCGGAGGTTTGCTGt................................................................................. 26 t 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..........................CGGGCGCCGTGAGAGCTG.............................................................................................................................................................................................................. 18 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
.........................ACGGGCGCCGTGAGAGCTG.............................................................................................................................................................................................................. 19 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
........................................................................................................................................AAACAAGATGACTTGAGGTCGGAGGTT....................................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................TTAACGAGGAAAGAAAAACAAGATGAC...................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
....................................................................................................................................................TTGAGGTCGGAGGTTTGCTGCGCGA............................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..................................................................................................................................................ACTTGAGGTCGGAGttc....................................................................................... 17 ttc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
..................................................................................AGGGTCGGCGCGGGAGGG...................................................................................................................................................... 18 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................TAACGAGGAAAGAAAAACAAGATGACTT.................................................................................................... 28 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................TAGGAAGCACACCCGAGACTGAGGa 25 a 1.00 0.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
...........CGGCTTCCATCTTCACGG............................................................................................................................................................................................................................. 18 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..GCAAGATGGCGGCTTCCATCTT.................................................................................................................................................................................................................................. 22 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................TAGGAAGCACACCCGAGACTGAGGaa 26 aa 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................GAGGAAAGAAAAACAAGATGACTTGAG................................................................................................. 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................ATTTAGTTTGGATGTTAACGAGGAAA..................................................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................CAGCTTCACTGAGAAGAGGGTCGGCGC............................................................................................................................................................. 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................TTAGTTTGGATGTTAACGAGGAAAGAAA................................................................................................................. 28 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..................................................................................................................TTGGATGTTAACGAGGAAAGAAAAACAAGA.......................................................................................................... 30 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................TGCACAGTGTAGTGCCCATGACCCGCGTT........................................... 29 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -

Antisense strand
CTGCAAGATGGCGGCTTCCATCTTCACGGGCGCCGTGAGAGCTGCCTCAGGTCAGTGTTCTATTGACAGCTTCACTGAGAAGAGGGTCGGCGCGGGAGGGAGTGGGAATTTAGTTTGGATGTTAACGAGGAAAGAAAAACAAGATGACTTGAGGTCGGAGGTTTGCTGCGCGATACCTTGCACAGTGTAGTGCCCATGACCCGCGTTCACTGGATCCACCCTGCCCTAGGAAGCACACCCGAGACTGAGG
.............................................................................................................................((.((......((((....((((.....))))...)))).)).))................................................................................
.........................................................................................................106..............................................................171.............................................................................
Size Perfect hit Total Norm Perfect Norm SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
........................................................................................................................................................................................GTGTAGTGCCCATGACCCGCGTTCA......................................... 25 1 3.00 3.00 - - - - 3.00 - - - - - - - - - - - - - - - - - - - - -
...................................TGAGAGCTGCCTCAGGTCAGTGTTCTA............................................................................................................................................................................................ 27 1 3.00 3.00 - - - - 3.00 - - - - - - - - - - - - - - - - - - - - -
....................................GAGAGCTGCCTCAGGTCAGTGTTCTA............................................................................................................................................................................................ 26 1 2.00 2.00 - - - - - - 2.00 - - - - - - - - - - - - - - - - - - -
..................................GTGAGAGCTGCCTCAGGTCAGTGTTCTA............................................................................................................................................................................................ 28 1 2.00 2.00 - - 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - -
........................................GCTGCCTCAGGTCAGTGTTCTATTGACA...................................................................................................................................................................................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...........CGGCTTCCATCTTCACGGGCGCCGTGAGA.................................................................................................................................................................................................................. 29 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.................................CGTGAGAGCTGCCTCAGGTCAGTGTTC.............................................................................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
.......................................................................................................................................................................GCGCGATACCTTGCACAGTGTAGTGCCCA...................................................... 29 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
......................................GAGCTGCCTCAGGTCAGTGTTCTATTG......................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -