| Gene: mKIAA4190 | ID: uc009btp.1_intron_3_0_chr6_47899019_f.5p | SPECIES: mm9 |
|
|
|
(1) OTHER.ip |
(3) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(1) TDRD1.ip |
(14) TESTES |
| TGAGCAGCAGCAAGAGGAAGCAACCATGATTCCACCTGAGCCAGGCACTGGTAAGTGAGAACAGCTGGACAGCAGCAACAAGCCAGATGTTGAACTGTGCGGAGTAGGCTCTTGGGAGCTGAACCTTGAACAGGTAGGTTTAGTCTTTTCAGTGCTCAGATGTCTGAATAGCACTGTGGGGGCCTGGACACACCCATCTGCCTGGAGTAAGGGGAAGAGTGTGAATGAGCTTTCTACCGTGGCCATGTCT ...........................................(((((((((..((....)).((((.....)))).....))))).))))...((((.((..((.(((((....)))))..))..)).))))..................................................................................................................... ...........................................44................................................................................................142.......................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT3() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................AAGTGAGAACAGCTGGACAGCAGC.............................................................................................................................................................................. | 24 | 1 | 4.00 | 4.00 | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TGGTAAGTGAGAACAGCTGGACAGCAGCA............................................................................................................................................................................. | 29 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................TTGGGAGCTGAACCTTGAACAGGTAGG................................................................................................................ | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TAAGTGAGAACAGCTGGACAGCAGCAA............................................................................................................................................................................ | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGTTGAACTGTGCGGAGT................................................................................................................................................. | 18 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ................................................TGGTAAGTGAGAACAGCTGGACAGCAGC.............................................................................................................................................................................. | 28 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................TGGGAGCTGAACCTTGAACAGGTAGGTT.............................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................AACAAGCCAGATGTTGAACTGTGCGG.................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................CAAGCCAGATGTTGAACTGTGCGGAGTA................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................TGGGAGCTGAACCTTGAACAGGTAGGT............................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................TGGGAGCTGAACCTTGAACAGGTAGGTa.............................................................................................................. | 28 | a | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................GTGAGAACAGCTGGACAGCAGCAACA.......................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................TGGTAAGTGAGAACAGCTGGACAGCAGCAA............................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ................................................TGGTAAGTGAGAACAGCTGGACAGCAG............................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................................TCAGATGTCTGAATAGCACTGTGGGG..................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................................................................................................................................TCTGAATAGCACTGTGGGGGCCTGGAC............................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TAAGTGAGAACAGCTGGACAGCAGCAAC........................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TGGTAAGTGAGAACAGCTGGACAGCAGCAt............................................................................................................................................................................ | 30 | t | 1.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................GATGTTGAACTGTGCGGAGTAGGCTC........................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................................................................................................................................TAGTCTTTTCAGTGCTCAGATGTCTG.................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .......................................................TGAGAACAGCTGGACAGCAG............................................................................................................................................................................... | 20 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - |
| ........................................................................................................TAGGCTCTTGGGAGCT.................................................................................................................................. | 16 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 | - |
| ........................................................................................................TAGGCTCTTGGGAGCgg................................................................................................................................. | 17 | gg | 0.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 |
| ........................................................................................................TAGGCTCTTGGGAGC................................................................................................................................... | 15 | 9 | 0.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 | - |
| TGAGCAGCAGCAAGAGGAAGCAACCATGATTCCACCTGAGCCAGGCACTGGTAAGTGAGAACAGCTGGACAGCAGCAACAAGCCAGATGTTGAACTGTGCGGAGTAGGCTCTTGGGAGCTGAACCTTGAACAGGTAGGTTTAGTCTTTTCAGTGCTCAGATGTCTGAATAGCACTGTGGGGGCCTGGACACACCCATCTGCCTGGAGTAAGGGGAAGAGTGTGAATGAGCTTTCTACCGTGGCCATGTCT ...........................................(((((((((..((....)).((((.....)))).....))))).))))...((((.((..((.(((((....)))))..))..)).))))..................................................................................................................... ...........................................44................................................................................................142.......................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT3() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................GTTTAGTCTTTTCAGTGCTCAGATGTCTGA................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |