| Gene: mTPK1 | ID: uc009bss.1_intron_0_0_chr6_43543143_r.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(11) TESTES |
| TTGTCAGGCTCTGGCAGAGCGTCTCAGGAGAACAGCCATTCAGGCTTCCATCAGCAAGCACTTCCCGGCATCTACAATAGTGTCTGCATTTGAACTCTGACCTAAATTACTTATTAAAGGGTACTAAAAATTTAAGTTAGAATCTAAAAGACTGTCCTAGATTCTGTAATTTGTCTCTACTCAGTCTCTCTGTTCTTTAGTTCTAGGCAAGAAGAGCCAAGAAGTGCTTGCTGAGAGGAGACTGATAGAG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................ACTGTCCTAGATTCTGTAATTTGTCTCTACTCAGTCTCTCTGTTCTTTAGTT................................................ | 52 | 1 | 108.00 | 108.00 | 108.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................TTCCCGGCATCTACAcca........................................................................................................................................................................... | 18 | cca | 3.00 | 0.00 | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - |
| ...............................................................CCCGGCATCTACAcca........................................................................................................................................................................... | 16 | cca | 2.00 | 0.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................AAGAAGTGCTTGCTGcgag............. | 19 | cgag | 2.00 | 0.00 | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - |
| ..............................................................TCCCGGCATCTACAcaa........................................................................................................................................................................... | 17 | caa | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................AAGAAGTGCTTGCTGgga.............. | 18 | gga | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................TTCCCGGCATCTtacc............................................................................................................................................................................. | 16 | tacc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| TTGTCAGGCTCTGGCAGAGCGTCTCAGGAGAACAGCCATTCAGGCTTCCATCAGCAAGCACTTCCCGGCATCTACAATAGTGTCTGCATTTGAACTCTGACCTAAATTACTTATTAAAGGGTACTAAAAATTTAAGTTAGAATCTAAAAGACTGTCCTAGATTCTGTAATTTGTCTCTACTCAGTCTCTCTGTTCTTTAGTTCTAGGCAAGAAGAGCCAAGAAGTGCTTGCTGAGAGGAGACTGATAGAG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................TCTCAGGAGAACAGtggc....................................................................................................................................................................................................................... | 18 | tggc | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................................................GCAAGCACTTCCCGGCATCTACAA............................................................................................................................................................................. | 24 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | 0.25 |
| .....................................................GCAAGCACTTCCCGGCATCTACAATA........................................................................................................................................................................... | 26 | 4 | 0.25 | 0.25 | - | 0.25 | - | - | - | - | - | - | - | - | - |
| ....................................................AGCAAGCACTTCCCGGCATCTACA.............................................................................................................................................................................. | 24 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | 0.25 | - | - |
| .....................................................GCAAGCACTTCCCGGCATCTACAATAG.......................................................................................................................................................................... | 27 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | 0.25 | - |