(8)
OTHER.mut
(1)
OVARY
(2)
PIWI.ip
(2)
PIWI.mut
(25)
TESTES

Sense strand
TCACTCCCGCAGCCCTCGCTCGCGTCGCTCGTGGCTCCACCCGCCATTGTGTAAGTGCGCGGCTGCCGGCGCGGGCTGGCGGGGCGGGGGCGCGGGAAAGAGGGAGCGAGGGAGGCCGCCCCTCGCCGCCAGTCCCCGGATGGAAGCTGGGGCGTCTGGGTGAATAGAGGCAGTGGCCGGAGCTGGAGCCTGGAGCTCGCTTGAGATTCCAGGTTCTCCAGCCTCTGCCTGGGACTTTCCCCCGCCCACCGCTGCACCTTCCTGGCCTCCCGTAGTGCCGGGTCCAAAGTGCCTGCTGCGGGATGCTTACTCCTGTCGCAGAATTACGTTTGGGAAATAACTTGGGACTTATTTTGTTTTCCATACAGAATCCATTCCCCGCTATGGAGCATGCCTTTACCCCGTTGGAACCCCTGCT
............................................................................................................................................................................................................................................................................((((......))))..........((((.((((((.......)))))).))))......((.((((((((((..((.....))..)))))))))).))....................................................
............................................................................................................................................................................................................................................................................269................................................................................................368................................................
Size Perfect hit Total Norm Perfect Norm mjTestesWT4()
Testes Data. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesWT3()
Testes Data. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
mjTestesWT2()
Testes Data. (testes)
SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR363960(GSM822762)
Adult Library#1Small RNA Miwi IPDuplexed run:. (testes)
...........................................................................................................................................................................AGTGGCCGGAGCTGGAGCCTGG................................................................................................................................................................................................................................. 22 1 13.00 13.00 - 3.00 3.00 - - 3.00 4.00 - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................CCGGATGGAAGCTGGGGC......................................................................................................................................................................................................................................................................... 18 2 5.50 5.50 3.50 - - - 2.00 - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................AGTGGCCGGAGCTGGAGCCTGGA................................................................................................................................................................................................................................ 23 1 5.00 5.00 - 1.00 3.00 - - - - 1.00 - - - - - - - - - - - - - - - - - -
........................................................................................................................................CGGATGGAAGCTGGGGCGTCTGG................................................................................................................................................................................................................................................................... 23 1 5.00 5.00 5.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................AGTGGCCGGAGCTGGAGCCTGGt................................................................................................................................................................................................................................ 23 t 4.00 13.00 - 3.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................GCTGGAGCCTGGAGCTCGCTTGA...................................................................................................................................................................................................................... 23 1 4.00 4.00 - 1.00 2.00 - - - - - - - - - - - - - - - 1.00 - - - - - - -
......................................................................GCGGGCTGGCGGGGCGGGG......................................................................................................................................................................................................................................................................................................................................... 19 1 4.00 4.00 - - - - - - - - 4.00 - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................GGAGCTGGAGCCTGGAGC.............................................................................................................................................................................................................................. 18 1 4.00 4.00 4.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................CTCGCCGCCAGTCCCCGGATGG................................................................................................................................................................................................................................................................................... 22 1 3.00 3.00 - - - 3.00 - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................CCGGAGCTGGAGCCTGGA................................................................................................................................................................................................................................ 18 1 2.00 2.00 - - - - 2.00 - - - - - - - - - - - - - - - - - - - - -
..................................................................CGGCGCGGGCTGGCGGGGCGGGGGC....................................................................................................................................................................................................................................................................................................................................... 25 1 2.00 2.00 - - - - 2.00 - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................AGTGGCCGGAGCTGGAGCCTGGAaaa............................................................................................................................................................................................................................. 26 aaa 2.00 5.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................AGTGGCCGGAGCTGGAGCCTGt................................................................................................................................................................................................................................. 22 t 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................................................ATTACGTTTGGGAgaat............................................................................... 17 gaat 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................AGTGGCCGGAGCTGGAGCCTGGAag.............................................................................................................................................................................................................................. 25 ag 1.00 5.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................AGTGGCCGGAGCTGGAGCCTGGtta.............................................................................................................................................................................................................................. 25 tta 1.00 13.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
.........................CGCTCGTGGCTCggt.......................................................................................................................................................................................................................................................................................................................................................................................... 15 ggt 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
.....................................................................................................................................................GGGCGTCTGGGTGAATAG........................................................................................................................................................................................................................................................... 18 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................CTGGGTGAATAGAGGCAGgg................................................................................................................................................................................................................................................... 20 gg 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
......................................................................................................................................................................GAGGCAGTGGCCGGAGCTGGAGCCTGGAG............................................................................................................................................................................................................................... 29 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................CGTAGTGCCGGGTCCAAAGTGCCTG........................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
...........................................................................................................................................................................AGTGGCCGGAGCTGGAGCCTGGAaaga............................................................................................................................................................................................................................ 27 aaga 1.00 5.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
......................................................................GCGGGCTGGCGGGGCGG........................................................................................................................................................................................................................................................................................................................................... 17 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................AGGCAGTGGCCGGAGCTGGAGC..................................................................................................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
.....................................................................................................................................CCCCGGATGGAAGCTGGGGCGT....................................................................................................................................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...........................................................................................................................................................................AGTGGCCGGAGCTGGAGCCTG.................................................................................................................................................................................................................................. 21 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
....................................................................................................................................................................................................TCGCTTGAGATTgatt.............................................................................................................................................................................................................. 16 gatt 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................AGCTGGAGCCTGGAGCTCGCT......................................................................................................................................................................................................................... 21 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................TGGCCGGAGCTGGAGCCTGGA................................................................................................................................................................................................................................ 21 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................CGGGCTGGCGGGGCGGGG......................................................................................................................................................................................................................................................................................................................................... 18 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................CCGGGTCCAAAGTGCCTGCTGC....................................................................................................................... 22 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................TGGAAGCTGGGGCGTCTGG................................................................................................................................................................................................................................................................... 19 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.......................................................................CGGGCTGGCGGGGCGat.......................................................................................................................................................................................................................................................................................................................................... 17 at 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
........................................................................................................AGCGAGGGAGGCCGCCCCTCGC.................................................................................................................................................................................................................................................................................................... 22 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................TAGTGCCGGGTCCAAAGTGCCTGaa......................................................................................................................... 25 aa 1.00 0.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
...........................................................................................................................................................................AGTGGCCGGAGCTGGAGCCTGaat............................................................................................................................................................................................................................... 24 aat 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
.......................................................................................................................................................................AGGCAGTGGCCGGAGCTGGAGCCTG.................................................................................................................................................................................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCATGCCTTTACCCCGTTGGAACCC..... 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
.................................................................................................................................................................................CGGAGCTGGAGCCTGGAGC.............................................................................................................................................................................................................................. 19 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
..............CTCGCTCGCGTCGCTCGTGGC............................................................................................................................................................................................................................................................................................................................................................................................... 21 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
...............................................................................................................................................................................................................................................................................................................................AGAATTACGTTTGGGAAATAACTTGG......................................................................... 26 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................AGTGGCCGGAGCTGGAGCCTGGAat.............................................................................................................................................................................................................................. 25 at 1.00 5.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................GGGGCGTCTGGGTGAATA............................................................................................................................................................................................................................................................ 18 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................TACTCCTGTCGCAGAATTACGTTTGGG.................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
.........................................................................................................................................................................................GAGCCTGGAGCTCGCTTGAGATTCC................................................................................................................................................................................................................ 25 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...................................................................................................................................................................................GAGCTGGAGCCTGGAGCTCGCTTG....................................................................................................................................................................................................................... 24 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................TGGAAGCTGGGGCGTCTGGGTGAAT............................................................................................................................................................................................................................................................. 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................GCCTGGAGCTCGCTTGAGATTCC................................................................................................................................................................................................................ 23 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...........................................................................................................................................................................AGTGGCCGGAGCTGGAGCCTGata............................................................................................................................................................................................................................... 24 ata 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................CGTCTGGGTGAATAGAGGC....................................................................................................................................................................................................................................................... 19 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
............................................................................................................................................TGGAAGCTGGGGCGTC...................................................................................................................................................................................................................................................................... 16 2 0.50 0.50 - - - - - - - - - - - - 0.50 - - - - - - - - - - - - -
....................................................................................................................................................GGGGCGTCTGGGTGA............................................................................................................................................................................................................................................................... 15 2 0.50 0.50 - - - - - - - - - - - - 0.50 - - - - - - - - - - - - -
.............................................................................................................................................GGAAGCTGGGGCGTCT..................................................................................................................................................................................................................................................................... 16 2 0.50 0.50 - - - - - - - - - - - - 0.50 - - - - - - - - - - - - -
............................................................................................................................................TGGAAGCTGGGGCGTCT..................................................................................................................................................................................................................................................................... 17 2 0.50 0.50 - - - - - - - - - - - 0.50 - - - - - - - - - - - - - -
.....................................................................................GGGGGCGCGGGAAAG.............................................................................................................................................................................................................................................................................................................................. 15 4 0.25 0.25 - - - - - 0.25 - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................TGGAAGCTGGGGCGT....................................................................................................................................................................................................................................................................... 15 5 0.20 0.20 - - - - - 0.20 - - - - - - - - - - - - - - - - - - - -

Antisense strand
TCACTCCCGCAGCCCTCGCTCGCGTCGCTCGTGGCTCCACCCGCCATTGTGTAAGTGCGCGGCTGCCGGCGCGGGCTGGCGGGGCGGGGGCGCGGGAAAGAGGGAGCGAGGGAGGCCGCCCCTCGCCGCCAGTCCCCGGATGGAAGCTGGGGCGTCTGGGTGAATAGAGGCAGTGGCCGGAGCTGGAGCCTGGAGCTCGCTTGAGATTCCAGGTTCTCCAGCCTCTGCCTGGGACTTTCCCCCGCCCACCGCTGCACCTTCCTGGCCTCCCGTAGTGCCGGGTCCAAAGTGCCTGCTGCGGGATGCTTACTCCTGTCGCAGAATTACGTTTGGGAAATAACTTGGGACTTATTTTGTTTTCCATACAGAATCCATTCCCCGCTATGGAGCATGCCTTTACCCCGTTGGAACCCCTGCT
............................................................................................................................................................................................................................................................................((((......))))..........((((.((((((.......)))))).))))......((.((((((((((..((.....))..)))))))))).))....................................................
............................................................................................................................................................................................................................................................................269................................................................................................368................................................
Size Perfect hit Total Norm Perfect Norm mjTestesWT4()
Testes Data. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesWT3()
Testes Data. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
mjTestesWT2()
Testes Data. (testes)
SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR363960(GSM822762)
Adult Library#1Small RNA Miwi IPDuplexed run:. (testes)
.............................................................................CGGGGCGGGGGCGCGGGgc.................................................................................................................................................................................................................................................................................................................................. 19 gc 2.00 0.00 - - - - - 1.00 - 1.00 - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................TTGAGATTCCAGGTtatt............................................................................................................................................................................................................ 18 tatt 1.00 0.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................................................GCTTACTCCTGTCG.................................................................................................... 14 3 0.33 0.33 - - - - - - - - - - - - - - - - - - - - - - - - - 0.33