| Gene: Ube2h | ID: uc009bez.1_intron_4_0_chr6_30211004_r.5p | SPECIES: mm9 |
|
|
(2) OTHER.mut |
(5) PIWI.ip |
(3) PIWI.mut |
(16) TESTES |
| CCTAGGAGGACTCAATGAATTCGTTGTCAAGTTTTACGGACCACAAGGAAGTAAGTACGCATGTGGGTATGTGTGCTTTTTACTATCTTTACTAGACTGTAGAGCTATCAACAGGCGCTGCATGGCTTTGGGAAGTAAGTTTTAACTAACTGCTAGAACCATCGAGTGAAGAGACCTTTGTCAGTCACGCACTTAGCTTTCTCACAAGTCCTGGGTTCTGTTATGCTTGGTTGCATAAGTGTTTCTTGGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT2() Testes Data. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................CTTTGGGAAGTAAGTTTTAACTAACTGCTAGAACCATCGAGTGAAGAGACCT......................................................................... | 52 | 1 | 57.00 | 57.00 | 57.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............TGAATTCGTTGTCAAGTTTTACGGACC................................................................................................................................................................................................................ | 27 | 2 | 11.00 | 11.00 | - | 4.00 | 2.50 | - | - | 1.00 | 2.00 | - | - | 0.50 | - | - | - | 0.50 | - | 0.50 |
| ...............TGAATTCGTTGTCAAGTTTTACGGAC................................................................................................................................................................................................................. | 26 | 2 | 2.00 | 2.00 | - | - | - | 0.50 | 0.50 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....GAGGACTCAATGAATTCGTTG................................................................................................................................................................................................................................ | 21 | 2 | 1.50 | 1.50 | - | - | - | - | - | - | - | - | 1.50 | - | - | - | - | - | - | - |
| ..TAGGAGGACTCAATGAATTCGTTGTC.............................................................................................................................................................................................................................. | 26 | 2 | 1.50 | 1.50 | - | - | - | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................TAACTGCTAGAACCATCGAGTGAAGAG............................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................AACTGCTAGAACCATCGAGTGAAGAG............................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................GTCAAGTTTTACGGACCACAAGGAAcacc.................................................................................................................................................................................................... | 29 | cacc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............TGAATTCGTTGTCAAGTTTTACGGgcca............................................................................................................................................................................................................... | 28 | gcca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....GGAGGACTCAATGAATTCGTTGTCgag........................................................................................................................................................................................................................... | 27 | gag | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................TTTACGGACCACAAGGAA........................................................................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................TACGGACCACAAGGAAGTAAGTACGC.............................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .........................GTCAAGTTTTACGGACCACAAGGAAc....................................................................................................................................................................................................... | 26 | c | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................GACTGTAGAGCTATCAACAGGCGCTGC................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..TAGGAGGACTCAATGAATTCGTTGTCAAG........................................................................................................................................................................................................................... | 29 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - |
| .................AATTCGTTGTCAAGTTTTACGGACCA............................................................................................................................................................................................................... | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| .............AATGAATTCGTTGTCAAGTTTTACGG................................................................................................................................................................................................................... | 26 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...AGGAGGACTCAATGAATTCG................................................................................................................................................................................................................................... | 20 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ...............TGAATTCGTTGTCAAGTTTTACGGACCACAAG........................................................................................................................................................................................................... | 32 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - |
| CCTAGGAGGACTCAATGAATTCGTTGTCAAGTTTTACGGACCACAAGGAAGTAAGTACGCATGTGGGTATGTGTGCTTTTTACTATCTTTACTAGACTGTAGAGCTATCAACAGGCGCTGCATGGCTTTGGGAAGTAAGTTTTAACTAACTGCTAGAACCATCGAGTGAAGAGACCTTTGTCAGTCACGCACTTAGCTTTCTCACAAGTCCTGGGTTCTGTTATGCTTGGTTGCATAAGTGTTTCTTGGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT2() Testes Data. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) |
|---|