(6)
OTHER.mut
(1)
OVARY
(2)
PIWI.ip
(3)
PIWI.mut
(20)
TESTES

Sense strand
ACTGTTTTCTAAGCATAAACTTGGCACTTGAAACTGTGTAAACAAAATAAATAATTTAAGTCCCTGCCTATTTTGTCTGTTTAATACTTAAAATGACTAACCAGGGGCAGTCCCTTCCCTGTCCCATGGGCGTGGGGAGCTTCCGTGACAGAATGCAGTTGAACGGAATACCCCCAGTGACTCCCTTCCTTTCTTCACAGGGTACCCAAAGCAGAGGACCTCAGCTCCTCGAAATGAGTTCCCACCCAAG
...............................................................((((((.....(((..((((.....))))..))).......))))))...(((((((((((...))))).)))))).(((((((((........)))..))))))..................................................................................
...............................................................64.........................................................................................................171.............................................................................
Size Perfect hit Total Norm Perfect Norm SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesWT4()
Testes Data. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
mjTestesWT3()
Testes Data. (testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
mjTestesWT2()
Testes Data. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
..............................................................................................................................................................................................TTCTTCACAGGGTACCCAAAGCAGAG.................................. 26 1 5.00 5.00 - - 1.00 - - - 4.00 - - - - - - - - - - - - - -
................................................................................................................................................GTGACAGAATGCAGTTGAACGGAATACC.............................................................................. 28 1 3.00 3.00 - - - - - - - 3.00 - - - - - - - - - - - - -
.................................................................................................................................................TGACAGAATGCAGTTGAACGGAATACCCC............................................................................ 29 1 3.00 3.00 - - - - - - - - - - - 1.00 - - - - 1.00 1.00 - - -
....................................................................TATTTTGTCTGTTTAATACTTAAAATGA.......................................................................................................................................................... 28 1 3.00 3.00 2.00 - - - - - - - - 1.00 - - - - - - - - - - -
............................................................................................................................................TTCCGTGACAGAATGCAGTTGAACGGA................................................................................... 27 1 2.00 2.00 - 1.00 - - - 1.00 - - - - - - - - - - - - - - -
........................................................................................................................................................ATGCAGTTGAACGGAATACCCCCAG......................................................................... 25 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................ATGCAGTTGAACGGAATACCCCCAGT........................................................................ 26 1 2.00 2.00 - - - - 1.00 - - - - - 1.00 - - - - - - - - - -
.........................................................................................................................................................TGCAGTTGAACGGAATACCCCCAGTG....................................................................... 26 1 2.00 2.00 - - - - 1.00 - - - - - - - - 1.00 - - - - - - -
...............................................................................................................................................CGTGACAGAATGCAGTTGAACGGAATACCCC............................................................................ 31 1 2.00 2.00 - 1.00 - - - - - - - - - - - - - - - - 1.00 - -
..............................................................................................................................................................TTGAACGGAATACCCCCAGTGACTCCCT................................................................ 28 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - -
.........................................................................................................................................................TGCAGTTGAACGGAATACCCCCAGTGAC..................................................................... 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - -
........................................................................................TAAAATGACTAACCAGGGGCAGTCCCTTCC.................................................................................................................................... 30 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
....................................................................................TACTTAAAATGACTAACCAGGGGCAG............................................................................................................................................ 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................TTGAACGGAATACCCCCAGTGACTCCCTTC.............................................................. 30 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................CGTGACAGAATGCAGTTGAACGGAATACCC............................................................................. 30 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................GTTGAACGGAATACCCCCAGTGA...................................................................... 23 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................TGACAGAATGCAGTTGAACGGAATACCC............................................................................. 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................CTTTCTTCACAGGGTACCCAAAGCAG.................................... 26 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - -
.................................................................................................................................................TGACAGAATGCAGTTGAACGGAATACC.............................................................................. 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................TCCGTGACAGAATGCAGTTGAACGGAA.................................................................................. 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................TGCAGTTGAACGGAATACCCCCA.......................................................................... 23 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - -
....................................................................................................................................................CAGAATGCAGTTGAACGGAATACCCCCAG......................................................................... 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................TGAACGGAATACCCCCAGTGACTCCCTT............................................................... 28 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - -
.........TAAGCATAAACTTGGCACTTGAAACTGT..................................................................................................................................................................................................................... 28 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................TGCAGTTGAACGGAATACCCCCAGTGA...................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - -
.................................................................................................................................................TGACAGAATGCAGTTGAACGGAATA................................................................................ 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................TGACAGAATGCAGTTGAACGGAA.................................................................................. 23 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................CGTGACAGAATGCAGTTGAACGGAATA................................................................................ 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - -
............................................................................................................................................TTCCGTGACAGAATGCAGTTGAACGG.................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00
...................................................TAATTTAAGTCCCTGCCTATTTTGTCTG........................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - -

Antisense strand
ACTGTTTTCTAAGCATAAACTTGGCACTTGAAACTGTGTAAACAAAATAAATAATTTAAGTCCCTGCCTATTTTGTCTGTTTAATACTTAAAATGACTAACCAGGGGCAGTCCCTTCCCTGTCCCATGGGCGTGGGGAGCTTCCGTGACAGAATGCAGTTGAACGGAATACCCCCAGTGACTCCCTTCCTTTCTTCACAGGGTACCCAAAGCAGAGGACCTCAGCTCCTCGAAATGAGTTCCCACCCAAG
...............................................................((((((.....(((..((((.....))))..))).......))))))...(((((((((((...))))).)))))).(((((((((........)))..))))))..................................................................................
...............................................................64.........................................................................................................171.............................................................................
Size Perfect hit Total Norm Perfect Norm SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesWT4()
Testes Data. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
mjTestesWT3()
Testes Data. (testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
mjTestesWT2()
Testes Data. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
........................................................................................................................................................................................CTTCCTTTCTTCACAGGGTACCCAAA........................................ 26 1 4.00 4.00 4.00 - - - - - - - - - - - - - - - - - - - -
........................................................TAAGTCCCTGCCTATTTTGTCTGTTTAA...................................................................................................................................................................... 28 1 3.00 3.00 - - - 1.00 - 1.00 - - - - - - - - - - 1.00 - - - -
...............................................................................................................................................................................................................................GCTCCTCGAAATGAGTTCCCACCCAA. 26 1 3.00 3.00 - 1.00 - 1.00 - - - - 1.00 - - - - - - - - - - - -
........................................................................................................................GTCCCATGGGCGTGGGGAGCTTCCGTGACA.................................................................................................... 30 1 3.00 3.00 3.00 - - - - - - - - - - - - - - - - - - - -
...................................................TAATTTAAGTCCCTGCCTATTTTGTCT............................................................................................................................................................................ 27 1 3.00 3.00 - 2.00 - - - 1.00 - - - - - - - - - - - - - - -
............................................................................................................................................................................CCCAGTGACTCCCTTCCTTTCTTCA..................................................... 25 1 3.00 3.00 - 1.00 - - - - - - - - - 2.00 - - - - - - - - -
...................CTTGGCACTTGAAACTGTGTA.................................................................................................................................................................................................................. 21 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................TACCCAAAGCAGAGtgaa.................................. 18 tgaa 2.00 0.00 2.00 - - - - - - - - - - - - - - - - - - - -
........................................................................................................................TCCCATGGGCGTGGGGAGCTTCCGTGACAa.................................................................................................... 30 a 2.00 0.00 2.00 - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................GACCTCAGCTCCTCGAAATGAGTTCCCA...... 28 1 2.00 2.00 - - 1.00 - - - - - 1.00 - - - - - - - - - - - -
............................................................................................................................................................................CCCAGTGACTCCCTTCCTTTCTTCACA................................................... 27 1 2.00 2.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - -
.........................................................................................AATGACTAACCAGGGGct............................................................................................................................................... 18 ct 2.00 0.00 - - - - - - - - - - - - 2.00 - - - - - - - -
.............................................................................................................................................................................CCAGTGACTCCCTTCCTTTCTTCACA................................................... 26 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................GGGAGCTTCCGTGACAGAATGCAGTTGA........................................................................................ 28 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - -
.....................................................................................................................................GGGGAGCTTCCGTGACAGAATGCAGTTGA........................................................................................ 29 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - -
.........................................................................................................................CATGGGCGTGGGGAGCTTCCGTGACAtga.................................................................................................... 29 tga 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................TCCGTGACAGAATGCAGTTG......................................................................................... 20 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - -
...........................................................GTCCCTGCCTATTTTGTCTGTTTAA...................................................................................................................................................................... 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................ACCTCAGCTCCTCGAAATGAGTTCCCA...... 27 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - -
..............................................................................................................................................................................TGACTCCCTTCCTTTCTTCaaa...................................................... 22 aaa 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................TGACTCCCTTCCTTTCTTCACAGttgg.................................................. 27 ttgg 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - -
...............................................................CTGCCTATTTTGTCTGTTTAATACTTA................................................................................................................................................................ 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................CAGTGACTCCCTTCCTTTCTTCAa..................................................... 24 a 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................CCAGTGACTCCCTTCCTTTCTTCACAtg................................................... 28 tg 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................GTGACAGAATGCAGTTGAACGGAA.................................................................................. 24 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - -
............GCATAAACTTGGCACTTGAAACTGTGTA.................................................................................................................................................................................................................. 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - -
.....................................................................................................................................GGGGAGCTTCCGTGACAGAATGCAGTTGAA....................................................................................... 30 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................CCCATGGGCGTGGGGAGCTTCCGTGACAt.................................................................................................... 29 t 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................GAATGCAGTTGAACGGAAT................................................................................. 19 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................CCCAGTGACTCCCTTCCTTTCTT....................................................... 23 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................GCTTCCGTGACAGAATGCAGTTGAAC...................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - -
............................................................................................................................................................................CCAGTGACTCCCTTCCTTTCTTCACAa................................................... 27 a 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - -
..................ACTTGGCACTTGAAACTGTGTAAACAAA............................................................................................................................................................................................................ 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
....................................................AATTTAAGTCCCTGCCTATTTTGTCTGT.......................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - -
..................................................TAATTTAAGTCCCTGCCTAa.................................................................................................................................................................................... 20 a 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - -
...........AGCATAAACTTGGCACTTGAAACTG...................................................................................................................................................................................................................... 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
...................CTTGGCACTTGAAACTGTGTAAACAA............................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - -
..........AAGCATAAACTTGGCACTTGAAACTGTGTA.................................................................................................................................................................................................................. 30 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................CCAGTGACTCCCTTCCTTTCTTCACAG.................................................. 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................CCCCAGTGACTCCCTTCCTTTCTTCA..................................................... 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - -
....................................................AATTTAAGTCCCTGCCTATTTTGTCTGTTTA....................................................................................................................................................................... 31 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 -
...............................................................CCTATTTTGTCTGTTTAATACTTAacg................................................................................................................................................................ 27 acg 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - -
...........................................................................................................................................................................................................ACCCAAAGCAGAGGACCTCAGCTCCTCG................... 28 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - -
..........................................................................................................................................................................................TCCTTTCTTCACAGGGTACCCAAAGCA..................................... 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - -
.............................................................................................................................................TCCGTGACAGAATGCA............................................................................................. 16 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - -