| Gene: Rpl21 | ID: uc009ank.1_intron_3_0_chr5_147646681_f | SPECIES: mm9 |
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(1) OTHER.ip |
(7) OTHER.mut |
(1) OVARY |
(4) PIWI.ip |
(1) PIWI.mut |
(26) TESTES |
| TACAATGTCACCCAGCATGCCGTGGGCATCATTGTCAACAAGCAGGTTAAGTGAGTAGAGCGCCTTTCTTTGACTAAGTAGCTGGCCTCACCCCCCCTTTCACTTTGCCAATTGGACTTAATGTCTTCATTGGCCATTCAAGTGGGGCAAAGGAAATAACCTTTTAAAACTCAGGCAAACTTAAGTGTTTGTCTTGTAACCTGTCAGGGGAAACATTAACGTTGGGGAGGCCGGATTCTGTGAGTAGTCGGTGCTGGCTTTTATAGCATTAAAACTTCGTTACAGGCTTCCTTTGCCTGGTTTGGCTAAGTTACTGTGGTTTGGGGTCTGTTTTTATCAGAAAAAGGAGCTTTAAAGTGCTCTCGAGGCCTCTTCCTTTGGGTGAGAATGATTGACATGTCACCATGTTGATCTTGGGGGAGTGTTAGTTAACAGCTGTCAGAACAGCGTACATTGTACTGTGTTTCTGAGTGAAGCATTTAGAACTTACCGGTCTTTGCTCATTCCAGGGGCAAAATTCTGGCCAAGAGGATCAATGTGCGGATTGAGCACATCAAGC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT4() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT2() Testes Data. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGCCAAGAGGATCAATGTGCGGt............... | 27 | t | 25.00 | 0.00 | 5.00 | 2.00 | - | 3.00 | 1.00 | 4.00 | - | - | 4.00 | 1.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGCCAAGAGGATCAATGTGCGt................ | 26 | t | 20.00 | 0.00 | 4.00 | 5.00 | - | 2.00 | 2.00 | 1.00 | - | - | - | 2.00 | - | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................ACATGTCACCATGTTGATCTTGGGGGAGTG....................................................................................................................................... | 30 | 1 | 6.00 | 6.00 | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................TTTGACTAAGTAGCTGGCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 20 | 1 | 6.00 | 6.00 | - | - | - | - | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................GTGAGAATGATTGACA.................................................................................................................................................................. | 16 | 1 | 5.00 | 5.00 | - | - | - | - | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGTAGAGCGCCTTTCTTTGACTAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 3.00 | 3.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGCCAAGAGGATCAATGTGCGGtt.............. | 27 | tt | 3.00 | 0.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCAAGAGGATCAATGTGCGGATTGt........... | 28 | t | 3.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGCCAAGAGGATCAATGTGCGGt............... | 26 | t | 3.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGCCAAGAGGATCAATGTGCGGATa............. | 29 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATCAATGTGCGGATTGAaa......... | 22 | aa | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGCCAAGAGGATCAATGTccgg................ | 26 | ccgg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGCCAAGAGGATCAATGTGCGGtt.............. | 28 | tt | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGCCAAGAGGATCAATGTGCGa................ | 26 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGCCAAGAGGATCAATGTGCGtt............... | 27 | tt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................AACAAGCAGGTTAAGggtt........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 19 | ggtt | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................GGGGAGGCCGGATTCTG............................................................................................................................................................................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGATCAATGTGCGGATTGAGCACc...... | 27 | c | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................ACATGTCACCATGTTGATCTTGGGGGtgtg....................................................................................................................................... | 30 | tgtg | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGGCCAAGAGGATCAATGTGCGGt............... | 28 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAAAATTCTGGCCAAGAGGATC......................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................GCATCATTGTCAACAAGCAGGTTAAGggg......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | ggg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTCTGGCCAAGAGGATCAATGTGtt................. | 29 | tt | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................GTGAGAATGATTGACATGT............................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAAGAGGATCAATGTGCGGATTGt........... | 27 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGCCAAGAGGATCAATGTGCGt................ | 25 | t | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTGGCCAAGAGGATCAt....................... | 21 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCAAGAGGATCAATGTGCGGATTt............ | 27 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCAAGAGGATCAATGTGCGGATa............. | 26 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGGCCAAGAGGATCAATGTGCGa................ | 27 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGTAGAGCGCCTTTCTTTGACTAAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................TGGCTAAGTTACTGgaga............................................................................................................................................................................................................................................... | 18 | gaga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATTCTGGCCAAGAGGATCAATGc.................... | 27 | c | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| TACAATGTCACCCAGCATGCCGTGGGCATCATTGTCAACAAGCAGGTTAAGTGAGTAGAGCGCCTTTCTTTGACTAAGTAGCTGGCCTCACCCCCCCTTTCACTTTGCCAATTGGACTTAATGTCTTCATTGGCCATTCAAGTGGGGCAAAGGAAATAACCTTTTAAAACTCAGGCAAACTTAAGTGTTTGTCTTGTAACCTGTCAGGGGAAACATTAACGTTGGGGAGGCCGGATTCTGTGAGTAGTCGGTGCTGGCTTTTATAGCATTAAAACTTCGTTACAGGCTTCCTTTGCCTGGTTTGGCTAAGTTACTGTGGTTTGGGGTCTGTTTTTATCAGAAAAAGGAGCTTTAAAGTGCTCTCGAGGCCTCTTCCTTTGGGTGAGAATGATTGACATGTCACCATGTTGATCTTGGGGGAGTGTTAGTTAACAGCTGTCAGAACAGCGTACATTGTACTGTGTTTCTGAGTGAAGCATTTAGAACTTACCGGTCTTTGCTCATTCCAGGGGCAAAATTCTGGCCAAGAGGATCAATGTGCGGATTGAGCACATCAAGC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT4() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT2() Testes Data. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................CATTGTCAACAAGCgctt.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | gctt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................AGTGCTCTCGAGGCCatt............................................................................................................................................................................................. | 18 | att | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGGATCAATGTGCGGtc................ | 21 | tc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |