(6)
OTHER.mut
(6)
PIWI.ip
(1)
PIWI.mut
(1)
TDRD1.ip
(29)
TESTES

Sense strand
CCTGGTGCTCAGCAAACTCACTACAGGTTTGGGGTGTCAGCCGACAAGTAGCTGTGTGACTGATTGCTGACAGCCTGTCTGCTGCTTGGCTGTGGGAGTTGTACTGTCACTGCTTCTTGAGTCTCGGTAGTCTTGGGGGAGGGGCGGGGGCAGTGTTTTGTGCATCTGAGGGTAACACTCAGCCTGGCGCCCTTCCCCAGCTGATAATAGGTGGGCTGGATAAGATAGACCTGAACGACTGGAAGTCCAA
...............................................................................................(((...(((((..(((........)))..)))))..))).(((((((((((.((((.((((.....))))..(((.......))).))))..)))))))))))....................................................
..............................................................................................95.......................................................................................................200................................................
Size Perfect hit Total Norm Perfect Norm SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
............................................................................................................................................................................................................................TAAGATAGACCTGAACGACTGGAAGTCC.. 28 1 15.00 15.00 3.00 2.00 1.00 4.00 - 1.00 2.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - -
............................................................................................................................................................................................................TAATAGGTGGGCTGGATAAGATAGACC................... 27 1 7.00 7.00 2.00 2.00 1.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................TAATAGGTGGGCTGGATAAGATAGAC.................... 26 1 6.00 6.00 4.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
............................................................................................................................................................................................................................TAAGATAGACCTGAACGACTGGAAGTCCA. 29 1 5.00 5.00 - 1.00 1.00 2.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
.............................................................................................................................................................................................................................AAGATAGACCTGAACGACTGGAAGTCC.. 27 1 5.00 5.00 1.00 1.00 1.00 - 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - -
.............................................................................................................................................................................................................................AAGATAGACCTGAACGACTGGAAGTCCA. 28 1 4.00 4.00 1.00 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................TGTACTGTCACTGCTTCTTGAGTCTCGGT.......................................................................................................................... 29 1 3.00 3.00 2.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................TAATAGGTGGGCTGGATAAGATAGA..................... 25 1 3.00 3.00 2.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................AGATAGACCTGAACGACTGGAAGTCCA. 27 1 3.00 3.00 - - - - 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................GATAGACCTGAACGACTGGAAGTCCA. 26 1 2.00 2.00 - 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................AGATAGACCTGAACGACTGGAAGTCC.. 26 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................TCAGCCTGGCGCCCTTCCCCAGa................................................. 23 a 2.00 0.00 - - - - - - - - - 1.00 - - - - - - - 1.00 - - - - - - - - - - -
................................................................................................................................................................................ACTCAGCCTGGCGCCCTTCCCCA................................................... 23 1 2.00 2.00 - - - - - - - - - - - - - - - - 2.00 - - - - - - - - - - - -
................................................................................................................................................................................................................AGGTGGGCTGGATAAGATA....................... 19 1 2.00 2.00 - - - - - - - - - - - - - 2.00 - - - - - - - - - - - - - - -
..................................................................................................................................................................................TCAGCCTGGCGCCCTTCCCtt................................................... 21 tt 2.00 0.00 - - - - - - - - - - - - - - - 2.00 - - - - - - - - - - - - -
................................................TAGCTGTGTGACTGATTGCTGACAGCCT.............................................................................................................................................................................. 28 1 2.00 2.00 - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................TGATAATAGGTGGGCTGGATAAGATA....................... 26 1 2.00 2.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................GATAGACCTGAACGACTGGAAGTCCAA 27 1 2.00 2.00 - - - - - - - 1.00 - - - - 1.00 - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................TAAGATAGACCTGAACGACTGGAAGTC... 27 1 2.00 2.00 - 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................CACTCAGCCTGGCGCCCTTCCCCAc.................................................. 25 c 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
......................................................................................................................................GGGGGAGGGGCGGGGGCAGTGTTT............................................................................................ 24 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................AATAGGTGGGCTGGATAAGATtt...................... 23 tt 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................TAAGATAGACCTGAACGACTGGAAGT.... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
................................................................................................................................................................................ACTCAGCCTGGCGCCCTTCCCagt.................................................. 24 agt 1.00 0.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................ATAAGATAGACCTGAACGACTGGAAGTCC.. 29 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................GATAGACCTGAACGACTGGAAGTCC.. 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................ATAAGATAGACCTGAACGACTGGAAG..... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
..................................................................................................................................................................................................................GTGGGCTGGATAAGATAGACCTGAACG............. 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................TAGACCTGAACGACTGGAAGT.... 21 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................ATAAGATAGACCTGAACGACTGGAAGgcca. 30 gcca 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................GGATAAGATAGACCTGAACGACTGGAAGT.... 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................TGGCTGTGGGAGTTGTAa.................................................................................................................................................. 18 a 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................TAGACCTGAACGACTGG........ 17 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................GATAGACCTGAACGACTGGAAGTCCAt 27 t 1.00 2.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................AGGTGGGCTGGATAAGATAGACCTGAAC.............. 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
........................................................................................................................................................................................................................................GAACGACTGGAAGTCCAAa 19 a 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..................................................GCTGTGTGACTGATTGCTGACAGCC............................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
............................................................................................................................................................................................................TAATAGGTGGGCTGGATAAGATAGACa................... 27 a 1.00 6.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
.................................................................................................................................................................................................................................TAGACCTGAACGACTGGAAGTCCA. 24 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
.........................................................................................................................................................................................................TGATAATAGGTGGGCTGGATAAGATAGAC.................... 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................ATAATAGGTGGGCTGGATAAGATAGA..................... 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................TGGGGGAGGGGCGGGtggt.................................................................................................. 19 tggt 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
........................................................................................................................................................................................................................TGGATAAGATAGACCTGAACGACTGGA....... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................TAGACCTGAACGACTGGAAGTCCAAcaa 28 caa 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................AGCCTGGCGCCCTTCCCCAat................................................. 21 at 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00
..........................................................................................................................................................................................................................GATAAGATAGACCTGAACGACTGGAAG..... 27 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................TAAGATAGACCTGAACGACTGGAAGgcc.. 28 gcc 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................TTGTGCATCTGAGGGTAACACTCAG.................................................................... 25 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................GGATAAGATAGACCTGAACGACTGGAA...... 27 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
................................................................................................................................................................................ACTCAGCCTGGCGCCCTT........................................................ 18 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................TAGGTGGGCTGGATAAGATAGACCTGAAC.............. 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
.................................................................................CTGCTTGGCTGTGGGA......................................................................................................................................................... 16 9 0.11 0.11 - - - - - - - - - 0.11 - - - - - - - - - - - - - - - - - - -

Antisense strand
CCTGGTGCTCAGCAAACTCACTACAGGTTTGGGGTGTCAGCCGACAAGTAGCTGTGTGACTGATTGCTGACAGCCTGTCTGCTGCTTGGCTGTGGGAGTTGTACTGTCACTGCTTCTTGAGTCTCGGTAGTCTTGGGGGAGGGGCGGGGGCAGTGTTTTGTGCATCTGAGGGTAACACTCAGCCTGGCGCCCTTCCCCAGCTGATAATAGGTGGGCTGGATAAGATAGACCTGAACGACTGGAAGTCCAA
...............................................................................................(((...(((((..(((........)))..)))))..))).(((((((((((.((((.((((.....))))..(((.......))).))))..)))))))))))....................................................
..............................................................................................95.......................................................................................................200................................................
Size Perfect hit Total Norm Perfect Norm SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
......................................................................................................ACTGTCACTGCTTCTTGAGTCTCGGTA......................................................................................................................... 27 1 2.00 2.00 - - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - -
..............................................................................................GGAGTTGTACTGTCACTGCTTCTTGAGTC............................................................................................................................... 29 1 2.00 2.00 - - - - 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
................................................................................GCTGCTTGGCTGTGGGAGTTGTACTGTCA............................................................................................................................................. 29 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................GTCACTGCTTCTTGAGTCTCGGTAGTC...................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
........................................................................................CTGTGGGAGTTGTACTGTCACTGCTTCt...................................................................................................................................... 28 t 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
......................................................................................................ACTGTCACTGCTTCTTGAGTCTCGGTAGTC...................................................................................................................... 30 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
....GTGCTCAGCAAACTCA...................................................................................................................................................................................................................................... 16 4 0.25 0.25 - - 0.25 - - - - - - - - - - - - - - - - - - - - - - - - - -