| Gene: Smurf1 | ID: uc009alv.1_intron_1_0_chr5_145641579_r.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(16) TESTES |
| TGTGACAGGATCCACAAGAGTTCCTCTCCAAGGCTTCAAGGCTCTGCAAGGTGACTGACGTGGAGTCAGGGCCATTCCTGAGGTGTTGAACAGCAAGACTTGGAGTGTGGGCCATCCTGCTAGAGAGTGAGAGTGGCCAGTATATTCTCACAACATATAGTTAGCAGTGGGGCGCCTGGCAGGTGTGTGGCCACACTGGAGCCCCCCATGGGCTGATGGATCCCATGTGCTCTTTTAAAATCCAGGAGCA .................................................................................((((((..((.((.......(((((((.(((((..(((((....))).))..)))))...)))))))...(((.....))).)).))..)))))).......................................................................... .................................................................................82................................................................................................180.................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................TGAACAGCAAGACTTGGAGTGTGGGCC......................................................................................................................................... | 27 | 1 | 22.00 | 22.00 | 10.00 | 5.00 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................TTCAAGGCTCTGCAAGGTGACTGACGT............................................................................................................................................................................................. | 27 | 1 | 5.00 | 5.00 | 1.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................TGAACAGCAAGACTTGGAGTGTGGGCCA........................................................................................................................................ | 28 | 1 | 4.00 | 4.00 | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TGAGGTGTTGAACAGCAAGACTTGGAGT................................................................................................................................................ | 28 | 1 | 4.00 | 4.00 | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TGTTGAACAGCAAGACTTGGAGTGTG............................................................................................................................................. | 26 | 1 | 3.00 | 3.00 | - | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................................TCACAACATATAGTTAGCAGTGGGGCGCC.......................................................................... | 29 | 1 | 3.00 | 3.00 | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................TGAACAGCAAGACTTGGAGTGTGGG........................................................................................................................................... | 25 | 1 | 3.00 | 3.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TGAGGTGTTGAACAGCAAGACTTGGAG................................................................................................................................................. | 27 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TGAGGTGTTGAACAGCAAGACTTGGA.................................................................................................................................................. | 26 | 1 | 3.00 | 3.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................TAGTTAGCAGTGGGGCGCCTGGCAGG................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................TGAACAGCAAGACTTGGAGTGTGGGC.......................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TCTCCAAGGCTTCAAGGCTCTGCAAGGc...................................................................................................................................................................................................... | 28 | c | 2.00 | 0.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................TTCCTGAGGTGTTGAACAGCAAGACT...................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................................................................................................................................................ACATATAGTTAGCAGTGGGGCGCCTG........................................................................ | 26 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TGAGGTGTTGAACAGCAAGACTTGG................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................TTCAAGGCTCTGCAAGGTGACTGACGTG............................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................CTGACGTGGAGTCAGGGCCATTCCTGA......................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................GTTGAACAGCAAGACTTGGAGTGTGGG........................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .............................................................................................................................................................TAGTTAGCAGTGGGGCGCCTGGCAGGT.................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................CTAGAGAGTGAGAGTGGCCAGTATAT......................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................TGAACAGCAAGACTTGGAGTGTGGGCCATC...................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................TCCTGCTAGAGAGTGAGAGTGG.................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................TCCTGAGGTGTTGAACAGCAAGACTT..................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ....................................................................................................................CTGCTAGAGAGTGAGtca.................................................................................................................... | 18 | tca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .............................................................................................................................................................TAGTTAGCAGTGGGGCGCCTGGCA..................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................TGCTAGAGAGTGAGAGTGGCCAGTAT........................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................GAACAGCAAGACTTGGAGTGTGGGCC......................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................TTCCTGAGGTGTTGAACAGCAAGACTT..................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................TATAGTTAGCAGTGGGGCGCCTGGCAtt................................................................... | 28 | tt | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................AACAGCAAGACTTGGAGTGTGGGCCATC...................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................TCACAACATATAGTTAGCAGTGGGGCGgc.......................................................................... | 29 | gc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................TGCAAGGTGACTGACGTGGAGTCAGGGCC................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................TGTTGAACAGCAAGACTTGGAGTGTGG............................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................TGAGGTGTTGAACAGCAAGACTTGGAGTa............................................................................................................................................... | 29 | a | 1.00 | 4.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................CCAAGGCTTCAAGGCTCTGCAAGGctc.................................................................................................................................................................................................... | 27 | ctc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................GAGGTGTTGAACAGCAAGACTTGGAGT................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TGAGGTGTTGAACAGCAAGACTTGGAGTG............................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TCTCCAAGGCTTCAAGGCTCTGCA.......................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..............................................................................TGAGGTGTTGAACAGCAAGACTTGGAGTt............................................................................................................................................... | 29 | t | 1.00 | 4.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................TCAAGGCTCTGCAAGGTGACTGACGT............................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................AACAGCAAGACTTGGAGTGTGGGCCA........................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TGTGACAGGATCCACAAGAGTTCCTCTCCAAGGCTTCAAGGCTCTGCAAGGTGACTGACGTGGAGTCAGGGCCATTCCTGAGGTGTTGAACAGCAAGACTTGGAGTGTGGGCCATCCTGCTAGAGAGTGAGAGTGGCCAGTATATTCTCACAACATATAGTTAGCAGTGGGGCGCCTGGCAGGTGTGTGGCCACACTGGAGCCCCCCATGGGCTGATGGATCCCATGTGCTCTTTTAAAATCCAGGAGCA .................................................................................((((((..((.((.......(((((((.(((((..(((((....))).))..)))))...)))))))...(((.....))).)).))..)))))).......................................................................... .................................................................................82................................................................................................180.................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................AGGCTTCAAGGCTCaggg.............................................................................................................................................................................................................. | 18 | aggg | 2.00 | 0.00 | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ......................CCTCTCCAAGGCTTCAAGGCTCTGCA.......................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................AGGCTTCAAGGCTCagg.............................................................................................................................................................................................................. | 17 | agg | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................AGTGGCCAGTATATTCTCACAACATA............................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................TGGAGCCCCCCATGaagt........................................ | 18 | aagt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |