(6)
OTHER.mut
(1)
OVARY
(5)
PIWI.ip
(2)
PIWI.mut
(26)
TESTES

Sense strand
GTTGCCGGAGTCGCCGTCGGAGCCTGGAGCCCGGAGCCCCGCCGCGCCAGGTACGCTCCGGGCCCCGATGCTCCCCGAACTTGTGCAGCGTACCCCTTGGGTCCGCAAAGCAGAAGGTCCCCGAAACAGTCGGGGTCCCCAGAAGGGAAGCGGAGGGCAGGGATCAGGGGGAGAGGACGCATCGCTGCGCCTTGGACTCCCACCCGAGCTCTCAGTCTGCAGCACCGCCGAGGGCGGCGGTTCCCTACTT
...............................................................(((..(((((.(((..(((.(((.(((.((((...)))).)))...))).)))..((((((.....))))))((((.....))))..))).))))))))........................................................................................
...............................................................64.....................................................................................................167.................................................................................
Size Perfect hit Total Norm Perfect Norm SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
mjTestesWT1()
Testes Data. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR014236(GSM319960)
10 dpp total. (testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
....................................................................TGCTCCCCGAACTTGTGCAGCGTACCCC.......................................................................................................................................................... 28 1 3.00 3.00 - - - - - - - 2.00 - - - - - - - - - - - - - - - - 1.00 - -
..TGCCGGAGTCGCCGTCGGAGCCTGGAGa............................................................................................................................................................................................................................ 28 a 3.00 0.00 - - 3.00 - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................TTGGGTCCGCAAAGCAGAAGGTCCCC................................................................................................................................ 26 1 2.00 2.00 - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................TGCTCCCCGAACTTGTGCAGCGTACCCa.......................................................................................................................................................... 28 a 2.00 1.00 - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................TCCCCGAACTTGTGCAGCGTACCCCTT........................................................................................................................................................ 27 1 2.00 2.00 - - - - - - - - - - - - - - 1.00 - 1.00 - - - - - - - - - -
............................................................................................................................AACAGTCGGGGTCCCCAGAAGGGAAG.................................................................................................... 26 1 2.00 2.00 - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - -
............................................................................................................................AACAGTCGGGGTCCCCAGAAGGGAAGC................................................................................................... 27 1 2.00 2.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................AAGCAGAAGGTCCCCGAAACAGTCGG..................................................................................................................... 26 1 2.00 2.00 - - - - - - - - - - - 1.00 - - - - - - - - - - 1.00 - - - -
................................................................................................TTGGGTCCGCAAAGCAGAAGGTCCCCG............................................................................................................................... 27 1 2.00 2.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
....................................................................TGCTCCCCGAACTTGTGCAG.................................................................................................................................................................. 20 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................TCAGTCTGCAGCACCGCCGAGGGCGGa............ 27 a 1.00 0.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
...................................................................................................................................................................................................................TCAGTCTGCAGCACCGCCGAGGGCGGCGt.......... 29 t 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.......................................................................TCCCCGAACTTGTGCAGCGTACCCCTTG....................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...........................................................................................................................AAACAGTCGGGGTCCCCAGAAGGGAAGCGG................................................................................................. 30 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................TGGACTCCCACCCGAGCTCTCAGTCTGC.............................. 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
............GCCGTCGGAGCCTGGAG............................................................................................................................................................................................................................. 17 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.....................................................................................................TCCGCAAAGCAGAAGGTCCCCGAAAC........................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
................................................................................................................................................................................................TGGACTCCCACCCGAGCTCTCAGTCTGCA............................. 29 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................TGCGCCTTGGACTCCCACCCGAGCT........................................ 25 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..........TCGCCGTCGGAGCCTGGAGCCCGGA....................................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
............GCCGTCGGAGCCTGGAGCCCGGAGCCCCGCC............................................................................................................................................................................................................... 31 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..TGCCGGAGTCGCCGTCGGAGCCTGG............................................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
....................................................................TGCTCCCCGAACTTGTGCAGCGTACCCCT......................................................................................................................................................... 29 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
....CCGGAGTCGCCGTCGGAG.................................................................................................................................................................................................................................... 18 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................TCGCTGCGCCTTGGACTCCCACCCGAGC......................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
...GCCGGAGTCGCCGTCGGAGCCTGG............................................................................................................................................................................................................................... 24 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.............................................................GCCCCGATGCTCCtca............................................................................................................................................................................. 16 tca 1.00 0.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.............................................................................AACTTGTGCAGCGTACCCCTTGGGTCC.................................................................................................................................................. 27 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
....................................................................TGCTCCCCGAACTTGTGCAGCGTACCC........................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...........................................................................................................................AAACAGTCGGGGTCCCCAGAAGGGAAG.................................................................................................... 27 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.....................GCCTGGAGCCCGGAGCCCCGCCGC............................................................................................................................................................................................................. 24 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................TGGACTCCCACCCGAGCTCTCAGTCTGCAG............................ 30 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................TGGACTCCCACCCGAGCTCTCAGTCTG............................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...GCCGGAGTCGCCGTCGGAGCCTGGA.............................................................................................................................................................................................................................. 25 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................AAACAGTCGGGGTCCCCAGAAGGGAA..................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
............................................................................................................................AACAGTCGGGGTCCCCAGAAG......................................................................................................... 21 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.........................................................................CCCGAACTTGTGCAGCGTACCCCTTGGGTC................................................................................................................................................... 30 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
...............................................................................................................................................AGGGAAGCGGAGGGCAGGGA....................................................................................... 20 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
............................................................................................................................AACAGTCGGGGTCCa............................................................................................................... 15 a 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -

Antisense strand
GTTGCCGGAGTCGCCGTCGGAGCCTGGAGCCCGGAGCCCCGCCGCGCCAGGTACGCTCCGGGCCCCGATGCTCCCCGAACTTGTGCAGCGTACCCCTTGGGTCCGCAAAGCAGAAGGTCCCCGAAACAGTCGGGGTCCCCAGAAGGGAAGCGGAGGGCAGGGATCAGGGGGAGAGGACGCATCGCTGCGCCTTGGACTCCCACCCGAGCTCTCAGTCTGCAGCACCGCCGAGGGCGGCGGTTCCCTACTT
...............................................................(((..(((((.(((..(((.(((.(((.((((...)))).)))...))).)))..((((((.....))))))((((.....))))..))).))))))))........................................................................................
...............................................................64.....................................................................................................167.................................................................................
Size Perfect hit Total Norm Perfect Norm SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
mjTestesWT1()
Testes Data. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR014236(GSM319960)
10 dpp total. (testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
..................................................................................................................................................................................................GACTCCCACCCGAGCTCTCAGTCTGCA............................. 27 1 15.00 15.00 4.00 9.00 - - 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - -
...................................................................................................................................................................................................ACTCCCACCCGAGCTCTCAGTCTGCA............................. 26 1 10.00 10.00 1.00 - 2.00 - - 3.00 - - - - - - 1.00 - - 1.00 - 2.00 - - - - - - - - -
....................................................................................................................................................................................................CTCCCACCCGAGCTCTCAGTCTGCA............................. 25 1 8.00 8.00 - 4.00 3.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................TCTGCAGCACCGCCGat.................... 17 at 7.00 0.00 - - 7.00 - - - - - - - - - - - - - - - - - - - - - - - -
.............CCGTCGGAGCCTGGAGCCCGG........................................................................................................................................................................................................................ 21 1 6.00 6.00 - - - - - - - - 6.00 - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................CCCACCCGAGCTCTCAGTCTGCA............................. 23 1 3.00 3.00 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.............................................................GCCCCGATGCTCCCCGAACTTGTGCA................................................................................................................................................................... 26 1 3.00 3.00 1.00 - - 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................CCGAGCTCTCAGTCTGCAGCACCG....................... 24 1 2.00 2.00 - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................TCCCACCCGAGCTCTCAGTCTGCA............................. 24 1 2.00 2.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
.............................................................GCCCCGATGCTCCCCGAACTTGTG..................................................................................................................................................................... 24 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................GAGCTCTCAGTCTGtttc............................... 18 tttc 2.00 0.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................CCGCAAAGCAGAAGGTCCCCGAAACA.......................................................................................................................... 26 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................CCGAGCTCTCAGTCTGCAGCACCGCCGAGGGCGGC............ 35 1 2.00 2.00 - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................GCCTTGGACTCCCACCCGAGCTCTCA.................................... 26 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................CCTTGGACTCCCACCCGAGCTCTCA.................................... 25 1 2.00 2.00 - - - 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - -
.....................................................................................................TCCGCAAAGCAGAAGGTCCCCGAAACA.......................................................................................................................... 27 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................GGACTCCCACCCGAGCTCTCAGTCTG............................... 26 1 2.00 2.00 - - - - - - - - - - - - - - - - 1.00 - - 1.00 - - - - - - -
.................................................................................................................................................................................................GGACTCCCACCCGAGCTCTCAGTCTGCA............................. 28 1 2.00 2.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.........................................................CCGGGCCCCGATGCTCCCCG............................................................................................................................................................................. 20 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00
...........................................................................................................................................................................................................CCGAGCTCTCAGTCTGC.............................. 17 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................CCCGAGCTCTCAGTCTGCAGCAC......................... 23 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................TCCCACCCGAGCTCTCAGTCTGC.............................. 23 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................ACCCGAGCTCTCAGTCTGCAGCA.......................... 23 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...........................................................................................ACCCCTTGGGTCCGCAAAGCAGAA....................................................................................................................................... 24 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................CCCACCCGAGCTCTCAGTCTGCAG............................ 24 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................CCCGAGCTCTCAGTCTGC.............................. 18 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................GAGCTCTCAGTCTGCAGt............................ 18 t 1.00 0.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
...........................................................................................................................AAACAGTCGGGGTCCCCAGAAGGGAA..................................................................................................... 26 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................TTGGACTCCCACCCGAGCTCTCAGTCTGCA............................. 30 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................TGGACTCCCACCCGAGCTCTCAGTC................................. 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
........................................................................................................................................................................................CTGCGCCTTGGACTCCCA................................................ 18 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................CTCCCACCCGAGCTCTCAGTCT................................ 22 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................CTTGGACTCCCACCCGAGCTCTCA.................................... 24 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................CCACCCGAGCTCTCAGTCT................................ 19 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................TCCCACCCGAGCTCTCAGTCTGCAat............................. 26 at 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..............................................................CCCCGATGCTCCCCGAACTTGTGCA................................................................................................................................................................... 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
....................................................ACGCTCCGGGCCCCGA...................................................................................................................................................................................... 16 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -