| Gene: C330006K01Rik | ID: uc009aiq.1_intron_8_0_chr5_142946511_f.3p | SPECIES: mm9 |
|
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(5) OTHER.mut |
(1) OVARY |
(5) PIWI.ip |
(3) PIWI.mut |
(20) TESTES |
| AATGTCGCCGTGATTTGGGCTCTGTGGCCTCAGGGAGGTGTCAACATCTCCAGGAGGCCTGTTATGTTCTGAAGATTCATGCAGCCCTGGAGGCTCGACCAGGCTGCCTGAGCTCTGGCCTGCAGCAGGAATCCTCGTGAGTCACTGCAGATGCTGCTGCTATAGAGCCTAATGCCCTGCCGGCTCCTGGTGTCTTTCAGGGGAAGCGGCCGCCATGGACGCAGAAGCCGTCTACGGGCAGCTGCTCCGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................TGCTATAGAGCCTAATGCCCTGCCGG................................................................... | 26 | 1 | 9.00 | 9.00 | 7.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..TGTCGCCGTGATTTGGGCTCTGTGGC.............................................................................................................................................................................................................................. | 26 | 1 | 5.00 | 5.00 | - | - | 1.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..TGTCGCCGTGATTTGGGCTCTGTGG............................................................................................................................................................................................................................... | 25 | 1 | 4.00 | 4.00 | - | - | - | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TGTTCTGAAGATTCATGCAGCCCTGGA............................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | 1.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TGTTCTGAAGATTCATGCAGCCCTGG................................................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TGGTGTCTTTCAGGGGAAGCGGCCGCC.................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ........................................................................................................TGCCTGAGCTCTGGCCTGCAGCAG.......................................................................................................................... | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................TATGTTCTGAAGATTCATGCAGCCCT.................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 |
| .............................................................................................................................................................TGCTATAGAGCCTAATGCCCTGCCGGC.................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................CCATGGACGCAGAAGCCGT................... | 19 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................GGAATCCTCGTGAGTCACTGCAGATG................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGGAGGCTCGACCAGGCTGCCTGAGCTCTGGCCT................................................................................................................................. | 34 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TGGCCTGCAGCAGGAATCCTCGTGA.............................................................................................................. | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TGGTGTCTTTCAGGGGAAGCGGCCGC..................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..............................................................TATGTTCTGAAGATTCATGCAGCCCTG................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................TGGACGCAGAAGCCGTCTACGGGCAGC........ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................TGTTATGTTCTGAAGATTCATGCAGCC.................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................TGAGCTCTGGCCTGCAGCAGGAATCC.................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TGAGTCACTGCAGATGCTGCTGCTATA...................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................TCCTCGTGAGTCACTGCAGATGCTGCTGCT......................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..TGTCGCCGTGATTTGGGCTCTGTGGCCTC........................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TCTGAAGATTCATGCAGCCCTGGAGGCTC.......................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........TGATTTGGGCTCTGTGGCCTCAGGG....................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................CGGCCGCCATGGACGCAGAAGCCGTCTA................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............TGGGCTCTGTGGCCTCAGGGAGGTGTC................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................TGTCTTTCAGGGGAAGCGGCCGCCA................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................TGCCTGAGCTCTGGCCTGCAGCAGGAA....................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TGCCGGCTCCTGGTGTCTTTCAGccct.............................................. | 27 | ccct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..TGTCGCCGTGATTTGGGCTCTGTGGa.............................................................................................................................................................................................................................. | 26 | a | 1.00 | 4.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..TGTCGCCGTGATTTGGGCTCTGTG................................................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TGTTCTGAAGATTCATGCAGCCCTGc................................................................................................................................................................ | 26 | c | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TGTTATGTTCTGAAGATTCATGCAGC..................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................TTATGTTCTGAAGATTCATGCAGCCC................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............TTTGGGCTCTGTGGCCTCAGGGAGGa................................................................................................................................................................................................................... | 26 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TGTTATGTTCTGAAGATTCATGCAGCCC................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TCCAGGAGGCCTGTTATGTTCTGAAGt............................................................................................................................................................................... | 27 | t | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................CTGGTGTCTTTCAGGGGAAGCGGCC....................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TGGTGTCTTTCAGGGGAAGCGGCCGCa.................................... | 27 | a | 1.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................TGCAGATGCTGCTGCTtgcc..................................................................................... | 20 | tgcc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| AATGTCGCCGTGATTTGGGCTCTGTGGCCTCAGGGAGGTGTCAACATCTCCAGGAGGCCTGTTATGTTCTGAAGATTCATGCAGCCCTGGAGGCTCGACCAGGCTGCCTGAGCTCTGGCCTGCAGCAGGAATCCTCGTGAGTCACTGCAGATGCTGCTGCTATAGAGCCTAATGCCCTGCCGGCTCCTGGTGTCTTTCAGGGGAAGCGGCCGCCATGGACGCAGAAGCCGTCTACGGGCAGCTGCTCCGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................CTGCCGGCTCCTGGTGTCTTTCAaa................................................... | 25 | aa | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TGGCCTCAGGGAGGTGTCAACATCTCCA...................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TAATGCCCTGCCGGCTCCTGGTGTCTTT..................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................CTCCTGGTGTCTTTCtaga.................................................... | 19 | taga | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................GCCTGTTATGTTCTGAAGATTCATGCA....................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GGAGGCCTGTTATGTTCTGAAGATTCA........................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................AGATTCATGCAGCCCTGGA............................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |