| Gene: Ars2 | ID: uc009acb.1_intron_15_0_chr5_137743543_r | SPECIES: mm9 |
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(5) OTHER.mut |
(15) TESTES |
| CACCCAGACGTCCACATCATGCAGCACCATGTCCTGCCCATCCAGGCCAGGTAAGGTGTGGGGTTCTGGGGAGAAGGTGGTTGCCGAGTTTGGGGGAATGTCTGGGGCTGTGGGGGACTATGGTTGGATCTTGGGACAGGCTAGGTTCTAGGGTGCCTGCGTGCTTGGAGTGGTGGGCGTGTAGGCACAGGAAGCGGAGACCGACTACCTGGGCTCTCCGTCTTGCTCACAAGCAAGCCTTTGTGATTGGATGCCCCCCCAGGCTGGGCAGCATCGCAGAGATTGACTTGGGGGTGCCACCGCCCATAATGA .....................................................................................................................................................................(((...((.((((((.(((.((((((..(((((((((.........)).)))))))((((((....))))))..)))))).))).)))))))))))................................................... ..................................................................................................................................................................163................................................................................................262................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................................................................GGTGGGCGTGTAGGCACAGGAAGCGGAG................................................................................................................. | 28 | 1 | 13.00 | 13.00 | 13.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................TGGTTGGATCTTGGGAgcgg............................................................................................................................................................................ | 20 | gcgg | 7.20 | 1.60 | 0.20 | 3.20 | 1.00 | 1.20 | 0.40 | - | - | 0.80 | - | - | - | - | - | - | 0.40 |
| ................................................................................TTGCCGAGTTTGGGGGAATGTCTG................................................................................................................................................................................................................ | 24 | 1 | 5.00 | 5.00 | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................TGGTTGGATCTTGGGAgcg............................................................................................................................................................................. | 19 | gcg | 3.60 | 1.60 | - | 2.00 | 0.20 | 0.60 | 0.40 | - | 0.20 | 0.20 | - | - | - | - | - | - | - |
| ........................................................................................................................TGGTTGGATCTTGGGA................................................................................................................................................................................ | 16 | 5 | 1.60 | 1.60 | - | - | 1.00 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | 0.20 |
| .........................................................................................................................GGTTGGATCTTGGGAgcg............................................................................................................................................................................. | 18 | gcg | 1.17 | 0.33 | - | 0.83 | 0.17 | - | 0.17 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................GTTGGATCTTGGGAtt.............................................................................................................................................................................. | 16 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................................GTTGGATCTTGGGACcggg........................................................................................................................................................................... | 19 | cggg | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......GACGTCCACATCATGCAGCACCATGTCC...................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..CCCAGACGTCCACATCATGCAGCACC............................................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...........................................................................................GGGGGAATGTCTGGGGCTGTGGGGG.................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................GTTGGATCTTGGGAtgga............................................................................................................................................................................ | 18 | tgga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................TCGCAGAGATTGACTTGGGGGTGC............... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................GATTGACTTGGGGGTGCCACCGCCC....... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................................................................................TGGTTGGATCTTGGG................................................................................................................................................................................. | 15 | 8 | 0.50 | 0.50 | - | 0.12 | 0.25 | - | - | - | - | 0.12 | - | - | - | - | - | - | - |
| ........................................................................................................................TGGTTGGATCTTGGGAgt.............................................................................................................................................................................. | 18 | gt | 0.40 | 1.60 | - | - | - | 0.40 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................GGTTGGATCTTGGGA................................................................................................................................................................................ | 15 | 6 | 0.33 | 0.33 | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................GGTTGGATCTTGGGAgcgg............................................................................................................................................................................ | 19 | gcgg | 0.17 | 0.33 | - | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - |
| CACCCAGACGTCCACATCATGCAGCACCATGTCCTGCCCATCCAGGCCAGGTAAGGTGTGGGGTTCTGGGGAGAAGGTGGTTGCCGAGTTTGGGGGAATGTCTGGGGCTGTGGGGGACTATGGTTGGATCTTGGGACAGGCTAGGTTCTAGGGTGCCTGCGTGCTTGGAGTGGTGGGCGTGTAGGCACAGGAAGCGGAGACCGACTACCTGGGCTCTCCGTCTTGCTCACAAGCAAGCCTTTGTGATTGGATGCCCCCCCAGGCTGGGCAGCATCGCAGAGATTGACTTGGGGGTGCCACCGCCCATAATGA .....................................................................................................................................................................(((...((.((((((.(((.((((((..(((((((((.........)).)))))))((((((....))))))..)))))).))).)))))))))))................................................... ..................................................................................................................................................................163................................................................................................262................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................GGGTGCCTGCGTGCTaaa................................................................................................................................................... | 18 | aaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................................................................................................................................................GGGTGCCTGCGTGCTatc................................................................................................................................................... | 18 | atc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .............................................................................................................................................................................................................................................................CCCCCCCAGGCTGGG............................................ | 15 | 14 | 0.07 | 0.07 | - | - | - | - | - | - | - | - | 0.07 | - | - | - | - | - | - |