| Gene: Pom121 | ID: uc008zyi.1_intron_4_0_chr5_135859600_r | SPECIES: mm9 |
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(9) OTHER.mut |
(3) PIWI.ip |
(2) PIWI.mut |
(27) TESTES |
| AACGCAAGATCCAGCTGCTGCCCTCCCGGCGAGGGGACCAGCTCACCTTGGTATGTCTTGTCTATCCTTCTCGGCTCTTTTAGTCTCCAGGAGTCTGAGGGGCAGGGTCGTCTCCAGCATCTTGGGCTTGGCCTAACCTGCCTCCATTCTCTTGGGCAGCCTCCACCCCCAGAGCTTGGCTATTCCATCACTGCTGAAGACCTGGACAT .....................................................................................((((((((..((.((((((((((((..(((((....)))))..)))))....)))))))))..))))))))..................................................... ..............................................................................79..............................................................................159................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAGG....................................................................................................... | 23 | 1 | 40.00 | 40.00 | 23.00 | - | 2.00 | 3.00 | 1.00 | 1.00 | 1.00 | 2.00 | - | 1.00 | - | 2.00 | 1.00 | - | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................TCCAGGAGTCTGAGGGG........................................................................................................... | 17 | 3 | 19.67 | 19.67 | 0.67 | 8.00 | 5.33 | - | 0.33 | 0.33 | 0.33 | 0.33 | 3.33 | - | 0.33 | - | - | 0.67 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAG........................................................................................................ | 22 | 1 | 18.00 | 18.00 | - | 8.00 | - | 3.00 | 2.00 | 1.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAGa....................................................................................................... | 23 | a | 15.00 | 18.00 | 8.00 | - | 1.00 | 1.00 | - | 1.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAGGa...................................................................................................... | 24 | a | 15.00 | 40.00 | 5.00 | - | 6.00 | - | - | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAGGt...................................................................................................... | 24 | t | 13.00 | 40.00 | - | 5.00 | - | 2.00 | - | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | 1.00 |
| ..........................................................................................................................................TGCCTCCATTCTCTTGGGCAGt................................................. | 22 | t | 7.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | 3.00 | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - |
| .......................................................................................CAGGAGTCTGAGGGG........................................................................................................... | 15 | 13 | 6.54 | 6.54 | 0.38 | 0.77 | 0.62 | 1.38 | - | 0.15 | - | 0.15 | - | 2.92 | 0.15 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................TCCAGGAGTCTGAGGGGCAGG....................................................................................................... | 21 | 1 | 6.00 | 6.00 | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................TCCAGGAGTCTGAGGGGCAGaga..................................................................................................... | 23 | aga | 5.00 | 1.00 | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................TCCAGGAGTCTGAGGGGCAGGt...................................................................................................... | 22 | t | 5.00 | 6.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................CCAGGAGTCTGAGGGG........................................................................................................... | 16 | 6 | 4.17 | 4.17 | 0.67 | 1.00 | 0.50 | 0.33 | - | - | 0.17 | 0.83 | 0.17 | 0.17 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................AGTCTCCAGGAGTCTGAGGG............................................................................................................ | 20 | 1 | 4.00 | 4.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TGCCTCCATTCTCTTGGGCAGa................................................. | 22 | a | 4.00 | 4.00 | - | - | - | - | - | 3.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TGCCTCCATTCTCTTGGGCAG.................................................. | 21 | 1 | 4.00 | 4.00 | - | - | - | - | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....................................................................................CTCCAGGAGTCTGAGGGGCAGa....................................................................................................... | 22 | a | 4.00 | 0.00 | - | - | - | - | - | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................ATCACTGCTGAAGACCTGGACA. | 22 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................TCCAGGAGTCTGAGGGGCAGGaaaa................................................................................................... | 25 | aaaa | 3.00 | 6.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAGGtat.................................................................................................... | 26 | tat | 3.00 | 40.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAGt....................................................................................................... | 23 | t | 2.00 | 18.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAGta...................................................................................................... | 24 | ta | 2.00 | 18.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAt........................................................................................................ | 22 | t | 2.00 | 1.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTATGTCTTGTCTATCCTTCTCGGCT..................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAGaat..................................................................................................... | 25 | aat | 2.00 | 18.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTATGTCTTGTCTATCCTTCTCGGCTC.................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................TTCCATCACTGCTGAAGACCTGGACAT | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAtaa...................................................................................................... | 24 | taa | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAa........................................................................................................ | 22 | a | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAGGta..................................................................................................... | 25 | ta | 1.00 | 40.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................CTCCAGGAGTCTGAGGGGCAGta...................................................................................................... | 23 | ta | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................TCCAGGAGTCTGAGGGGCAGGG...................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TGCCTCCATTCTCTTGGGCAtt................................................. | 22 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................................................................................TCCAGGAGTCTGAGGGGCAGGat..................................................................................................... | 23 | at | 1.00 | 6.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAGGtt..................................................................................................... | 25 | tt | 1.00 | 40.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAGtaa..................................................................................................... | 25 | taa | 1.00 | 18.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................GTCTCCAGGAGTCTGAGGGGCA......................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................GGGGACCAGCTCACatt................................................................................................................................................................ | 17 | att | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGG............................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAGaa...................................................................................................... | 24 | aa | 1.00 | 18.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAGGaaa.................................................................................................... | 26 | aaa | 1.00 | 40.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................TCCAGGAGTCTGAGGGGCAG........................................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAGGaatt................................................................................................... | 27 | aatt | 1.00 | 40.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TGCCTCCATTCTCTTGGGCtt.................................................. | 21 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..........................................................................................................................................TGCCTCCATTCTCTTGGGCAc.................................................. | 21 | c | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAaga...................................................................................................... | 24 | aga | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................AACCTGCCTCCATTCTCTTGGt..................................................... | 22 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TGCCTCCATTCTCTTGGGCAGtt................................................ | 23 | tt | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAtt....................................................................................................... | 23 | tt | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................TCCAGGAGTCTGAGGGGCAGGa...................................................................................................... | 22 | a | 1.00 | 6.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAGGat..................................................................................................... | 25 | at | 1.00 | 40.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................TCCAGGAGTCTGAGGGGCAGGtttt................................................................................................... | 25 | tttt | 1.00 | 6.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................TTCCATCACTGCTGAAGACCTGGACA. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCAGGaat.................................................................................................... | 26 | aat | 1.00 | 40.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGCA......................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TCTCCAGGAGTCTGAGGGGaag........................................................................................................ | 22 | aag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................................CAGGAGTCTGAGGGGC.......................................................................................................... | 16 | 5 | 0.80 | 0.80 | - | - | - | 0.40 | - | - | - | 0.20 | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................CCAGGAGTCTGAGGG............................................................................................................ | 15 | 17 | 0.06 | 0.06 | - | - | - | 0.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AACGCAAGATCCAGCTGCTGCCCTCCCGGCGAGGGGACCAGCTCACCTTGGTATGTCTTGTCTATCCTTCTCGGCTCTTTTAGTCTCCAGGAGTCTGAGGGGCAGGGTCGTCTCCAGCATCTTGGGCTTGGCCTAACCTGCCTCCATTCTCTTGGGCAGCCTCCACCCCCAGAGCTTGGCTATTCCATCACTGCTGAAGACCTGGACAT .....................................................................................((((((((..((.((((((((((((..(((((....)))))..)))))....)))))))))..))))))))..................................................... ..............................................................................79..............................................................................159................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................................CTATTCCATCACTaac................. | 16 | aac | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |