| Gene: Baz1b | ID: uc008zxx.1_intron_0_0_chr5_135663627_f.5p | SPECIES: mm9 |
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(4) OTHER.mut |
(2) PIWI.ip |
(3) PIWI.mut |
(14) TESTES |
| GAGCCGCTCTTCACCATCCCGCACACTCAGGAGGCCTTCCGCACCCGGGAGTATCCTTTCTCCGCGCGCGGTGTGGACGCTCGGCCGCGGCTGCGCAGGGCGAGGGATGGAGATGGCGAGATGCGAATGGGCCGCGCGCGGCTCGCGGGGCAGCTGTCACCGCACGGGGCCGTCCGCGGGCCGTGATGCCCGGGGCCCTGCTTTACCCGGGCTTGGGAGCTCCGCGGCGAGATCCCTCCGGGCCGTCTCC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................TGCGCAGGGCGAGGGATGGAGATGGC..................................................................................................................................... | 26 | 1 | 26.00 | 26.00 | 24.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................TGCGCAGGGCGAGGGATGGAGATGG...................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................TCCTTTCTCCGCGCGCGGTGTGGAC............................................................................................................................................................................ | 25 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| ..................................................GTATCCTTTCTCCGCGCGCGGTGTGG.............................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TCCCGCACACTCAGGAGGCCTTC................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................TGCGCAGGGCGAGGGATGGAGATGGa..................................................................................................................................... | 26 | a | 1.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....................GCACACTCAGGAGGCCTTCCGCA............................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...........................................................................................TGCGCAGGGCGAGGGATGGAGATG....................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .......TCTTCACCATCCCGCACACTCAGGAGGCC...................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........CACCATCCCGCACACTCAGGA.......................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................GAGGGATGGAGATGGCGAGATG............................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .....................................................TCCTTTCTCCGCGCGCGGT.................................................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............CCATCCCGCACACTCAGGAGGCCTTCCGCACC............................................................................................................................................................................................................. | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................................................................................................................................................................GATCCCTCCGGGCgcgc... | 17 | gcgc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................TGCTTTACCCGGGCTTGGGAGCTCCGC......................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................TCCCGCACACTCAGGAGGCCTTCCGCAC.............................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| GAGCCGCTCTTCACCATCCCGCACACTCAGGAGGCCTTCCGCACCCGGGAGTATCCTTTCTCCGCGCGCGGTGTGGACGCTCGGCCGCGGCTGCGCAGGGCGAGGGATGGAGATGGCGAGATGCGAATGGGCCGCGCGCGGCTCGCGGGGCAGCTGTCACCGCACGGGGCCGTCCGCGGGCCGTGATGCCCGGGGCCCTGCTTTACCCGGGCTTGGGAGCTCCGCGGCGAGATCCCTCCGGGCCGTCTCC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...CCGCTCTTCACCATCCCGCACACTCA............................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................CGGTGTGGACGCTCGGCCGCGGCT.............................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............CCATCCCGCACACTCAGGAG......................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |