| Gene: Eif4h | ID: uc008zwq.1_intron_1_0_chr5_135097957_r.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(3) PIWI.ip |
(16) TESTES |
| GATTGCTTCCCTGGCATAAGGCCTGGCTCCCATCCCAAATGTGTTCTCACCCAGCAAATGCAGGGGGTTTTGTACGCTTTACTTTTGGAAAGTTTCCAGATACTAGACAAACATGACATTGAAGAATCAATTTGTAGAGCATTGTGCATCTCTGTTGATGTGACAGTGTAAACAGTTTTTGACTCTGTCTTCTTTCCTAGGCTACAGGGATGACTTCTTAGGGGGTAGGGGGGGCAGTCGCCCTGGGGAC ..............................................................................................................................((((.((((...((((((((((((......))))).)))))))..))))...))))((((((..(((.....)))..))))))......................................... ............................................................................................................109.................................................................................................209....................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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| .................................................................................................................TGACATTGAAGAATCAATTTGTAGAGC.............................................................................................................. | 27 | 1 | 9.00 | 9.00 | 4.00 | 3.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................TGAAGAATCAATTTGTAGAGCATTG.......................................................................................................... | 25 | 1 | 4.00 | 4.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................TTGACTCTGTCTTCTTTCCTAGGCTAC............................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TGCAGGGGGTTTTGTACGCTTTACTTT..................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - |
| .................................................................................................................TGACATTGAAGAATCAATTTGTAGAGCATTG.......................................................................................................... | 31 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................GAAGAATCAATTTGTAGAGCATTGTGC....................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................TAGGCTACAGGGATGACTTCTTAGG............................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGCTACAGGGATGACTTCTTAGGG........................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................................................................TACTAGACAAACATGACATTGAAGAATC.......................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................TGAAGAATCAATTTGTAGAGCATTGTGC....................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .......................................................................................................................TGAAGAATCAATTTGTAGAGCATTGTG........................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TACGCTTTACTTTTGGAAAGTTTCCAGA...................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................TGGAAAGTTTCCAGATACTAGACAAACATGA...................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................................................................................AATTTGTAGAGCATTGTGCAT..................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................CAGATACTAGACAAACATGACATTGAAGA............................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TACAGGGATGACTTCTTAGGGGGTtt...................... | 26 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .......................................................................................................................TGAAGAATCAATTTGTAGAGCATTGTGCATCT................................................................................................... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................TGCAGGGGGTTTTGTACGCTTTACTT...................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TTTTTGACTCTGTCTTCTTTCCTAGGC................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................................................................................................................................GAGCATTGTGCATCTCTGTTGATGTGAC...................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................TCCCAAATGTGTTCTCACCCAGCAAAT............................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| GATTGCTTCCCTGGCATAAGGCCTGGCTCCCATCCCAAATGTGTTCTCACCCAGCAAATGCAGGGGGTTTTGTACGCTTTACTTTTGGAAAGTTTCCAGATACTAGACAAACATGACATTGAAGAATCAATTTGTAGAGCATTGTGCATCTCTGTTGATGTGACAGTGTAAACAGTTTTTGACTCTGTCTTCTTTCCTAGGCTACAGGGATGACTTCTTAGGGGGTAGGGGGGGCAGTCGCCCTGGGGAC ..............................................................................................................................((((.((((...((((((((((((......))))).)))))))..))))...))))((((((..(((.....)))..))))))......................................... ............................................................................................................109.................................................................................................209....................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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