| Gene: Hip1r | ID: uc008zos.1_intron_12_0_chr5_124446853_f | SPECIES: mm9 |
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(5) OTHER.mut |
(1) PIWI.ip |
(1) PIWI.mut |
(12) TESTES |
| AGAGAGAGGTGGAGACCCTCCGTGCTGAGCTGGAGAAGATTAAGATGGAGGTGAGGGGCGTGGCCCAGGGTGGTCCCCGAGAGGGTGGTCCCCACATGGGCAAACCAGGGGTCCATCCTCTCGGTACCGCCCTGCAGGCACAGCGGTACATCTCCCAGCTGAAGGGCCAGGTGAATGGCCTGGAGGC ..........................................................((.((.((.....)).)).)).((((((((.((((...(((.....))))))).))))))))................................................................... ..........................................................59............................................................121................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................GCAAACCAGGGGTCgcga...................................................................... | 18 | gcga | 7.00 | 0.00 | 1.00 | 1.00 | 2.00 | - | - | - | - | - | 1.00 | - | 1.00 | 1.00 |
| ...................................................................................................GCAAACCAGGGGTCggga...................................................................... | 18 | ggga | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................ATCCTCTCGGTACCGCCCTGCA................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................CCCAGGGTGGTCCCCGAGAGGGTGGT.................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................ATCCTCTCGGTACCGCCC....................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......................TGCTGAGCTGGAGAAGATTAAGATGG........................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................ATCCTCTCGGTACCGCCCTGC.................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................................CCCAGGGTGGTCCCCGAGAGG....................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................GCTGAGCTGGAGAAGATTAAGATGGAG......................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................TGCTGAGCTGGAGAAGATTAAG............................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| AGAGAGAGGTGGAGACCCTCCGTGCTGAGCTGGAGAAGATTAAGATGGAGGTGAGGGGCGTGGCCCAGGGTGGTCCCCGAGAGGGTGGTCCCCACATGGGCAAACCAGGGGTCCATCCTCTCGGTACCGCCCTGCAGGCACAGCGGTACATCTCCCAGCTGAAGGGCCAGGTGAATGGCCTGGAGGC ..........................................................((.((.((.....)).)).)).((((((((.((((...(((.....))))))).))))))))................................................................... ..........................................................59............................................................121................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................CAAACCAGGGGTCCgcgc......................................................................... | 18 | gcgc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |