| Gene: A230106M15Rik | ID: uc008zkk.1_intron_0_0_chr5_122299134_f.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(2) PIWI.ip |
(2) PIWI.mut |
(16) TESTES |
| GCCAGGGGTGGGAGGATCACCTGGCCTCAGTGATTAGATGTGGGGGTGAGAGAGACAGCAGGGGCCACTTGCTGAAGCAGGATGGACTAGAAGGAAGCCGAGTACACCGTCACCTGCTGCCATGGCCAGAGGCCCTGGTTCCCTGTGTTCTGTCTCATTGTCATAACCTTGACGTGGATAATTTTGCTCTTACATTATAGATGAAGAGCTAGAGGTCCAGAGAGACTGACTGTGTGCCCCTGAAGTGACC ................................................................((((((((....))))).)))......(((.(((.(((.(((....(((.....((((.((((...)))).)))).....)))...))))))...((((......))))............))))))........................................................... ................................................................65.....................................................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
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| ...........................................................................................................................................................................................................................GAGAGACTGACTGTGTGCCCCTGA....... | 24 | 1 | 4.00 | 4.00 | 1.00 | - | - | - | - | - | - | - | 2.00 | - | 1.00 | - | - | - | - | - |
| .....................................................................TGCTGAAGCAGGATGGACTAGAAGGA........................................................................................................................................................... | 26 | 1 | 4.00 | 4.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................TAGATGAAGAGCTAGAGGTCCAGAGA........................... | 26 | 1 | 4.00 | 4.00 | 1.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................TACATTATAGATGAtgta.......................................... | 18 | tgta | 3.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | 1.00 | - |
| .............................................................................................................................................................................................TTACATTATAGATGAAGAGCTAGAGG................................... | 26 | 1 | 3.00 | 3.00 | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................TGCTGAAGCAGGATGGACTAGAAGG............................................................................................................................................................ | 25 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................TTGACGTGGATAATTTTGCTCTTACA........................................................ | 26 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGAAGCAGGATGGACTAGAAGGAAG......................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................TTAGATGTGGGGGTGAGAGAGACAGC............................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................................................................TGCTGAAGCAGGATGGACTAGAAG............................................................................................................................................................. | 24 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................TGGACTAGAAGGAAGCCGAGTACACCGT............................................................................................................................................ | 28 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................TGGACTAGAAGGAAGCCGAGTACACCG............................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................AGAGGTCCAGAGAGACTGAC.................... | 20 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TTATAGATGAAGAGCTAGAGGTCCAG.............................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TAGAAGGAAGCCGAGTACACCGTCAC......................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................................................TAACCTTGACGTGGATAATTTTGCTC............................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................GAGAGACTGACTGTGTGCCCCTGAA...... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................TAGAGGTCCAGAGAGACTGACTGTGTGC............. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................TAGATGAAGAGCTAGAGGTCCAGcga........................... | 26 | cga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................................................................................................................................................................ATGAAGAGCTAGAGGTCCAGAGAGA......................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .........................................................................................................................................................................TGACGTGGATAATTTTGCTCTTACAT....................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................TAACCTTGACGTGGATAATTTTGCTCT............................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................GACTGACTGTGTGCCCCTGAAGTGACC | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................................TCATAACCTTGACGTGGATAATTTTGCTCTT........................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................CTTGCTGAAGCAGGATGGACTAGAAG............................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................TTGCTGAAGCAGGATGGACTAGAAGt............................................................................................................................................................ | 26 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................TTGCTGAAGCAGGATGGACTAGAAGG............................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGAAGCAGGATGGACTAGAAGGA........................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................TGAAGAGCTAGAGGTCCAGAGAGACTGAC.................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGAAGCAGGATGGACTAGAAGGAAGCCGA..................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................TTACATTATAGATGAAGAGCTAGAGGTC................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................TGGACTAGAAGGAAGCCGAGTACACCGTC........................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TGACGTGGATAATTTTGCTCTTACATTA..................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGAAGCAGGATGGACTAGAAGGAAGC........................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................TAGATGAAGAGCTAGAGGTCCAGAG............................ | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................TGCTGAAGCAGGATGGACTAGAAGGt........................................................................................................................................................... | 26 | t | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TGACGTGGATAATTTTGCTCTTACATT...................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGAAGCAGGATGGACTAGAAGGAA.......................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TGACGTGGATAATTTTGCTCTTACA........................................................ | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................TGCTGAAGCAGGATGGACTAGAAGGAA.......................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................AGAGACTGACTGTGTGCCCCTGAAGTG... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................TCAGTGATTAGATGTGGGGGTGAGA....................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TCATAACCTTGACGTGGATAATTTTG................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................CACTTGCTGAAGCAGGATGGACTAGA............................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GATGAAGAGCTAGAGGTCCAGAGA........................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................GAGAGACTGACTGTGTGCCCCTG........ | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................TGGACTAGAAGGAAGCCGAGTACACC.............................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................GATGGACTAGAAGGAAGCCGAGTAC................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................TGATTAGATGTGGGGGTGAGAGAGAC.................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................AGCAGGATGGACTAGAAGGAAGCCGA..................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TTATAGATGAAGAGCTAGAGGTCCAGAGt........................... | 29 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GCCAGGGGTGGGAGGATCACCTGGCCTCAGTGATTAGATGTGGGGGTGAGAGAGACAGCAGGGGCCACTTGCTGAAGCAGGATGGACTAGAAGGAAGCCGAGTACACCGTCACCTGCTGCCATGGCCAGAGGCCCTGGTTCCCTGTGTTCTGTCTCATTGTCATAACCTTGACGTGGATAATTTTGCTCTTACATTATAGATGAAGAGCTAGAGGTCCAGAGAGACTGACTGTGTGCCCCTGAAGTGACC ................................................................((((((((....))))).)))......(((.(((.(((.(((....(((.....((((.((((...)))).)))).....)))...))))))...((((......))))............))))))........................................................... ................................................................65.....................................................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
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