chr5:121655815 121656064 +
(6)
OTHER.mut 		(4)
PIWI.ip 		(3)
PIWI.mut 		(26)
TESTES

Sense strand
TTGGTGGGGACAAGAACGGTGGCACCCGGGTGGTGAAGCTTCGAAAAATGGTGAGATCTAGTTTGGGTTGCTTTCCTTGGGGTTAGGGTTGAGGCTTGTCTGAAAGAGGCTATGTCAGTCAAGTCTAGTTGGGATAAGCTCTCAGGCTGGGGGTGTAGCTCATAGTGGGACCAGCACACTGGGGTTCTGGCTACTCCATTGCTGGCAAGTGGAAGGTGGGTATTTATCAAACTTGTGGTATTGATGTCTA


 Size Perfect hit Total Norm Perfect Norm mjTestesKO5()
Testes Data. (Zcchc11 testes) 		mjTestesKO8()
Testes Data. (Zcchc11 testes) 		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes) 		mjTestesWT2()
Testes Data. (testes) 		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes) 		mjTestesKO7()
Testes Data. (Zcchc11 testes) 		mjTestesWT4()
Testes Data. (testes) 		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes) 		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes) 		mjTestesKO6()
Testes Data. (Zcchc11 testes) 		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes) 		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes) 		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes) 		mjTestesWT3()
Testes Data. (testes) 		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes) 		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes) 		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes) 		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) 		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes) 		mjTestesWT1()
Testes Data. (testes) 		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes) 		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes) 		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes) 		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes) 		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes) 		SRR014231(GSM319955)
16.5 dpc total. (testes)
....................................................................................................................................................GGGGGTGTAGCTCATA...................................................................................... 16 2 137.50 137.50 62.00 46.00 15.50 7.50 - 1.00 1.00 - - 2.00 0.50 - - 1.50 - 0.50 - - - - - - - - - -
....................................................................................................................................................GGGGGTGTAGCTCATAtg.................................................................................... 18 tg 40.00 137.50 40.00 - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................GGGGGTGTAGCTCATAtgg................................................................................... 19 tgg 12.50 137.50 12.00 0.50 - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................GGGGGTGTAGCTCATAtggt.................................................................................. 20 tggt 10.50 137.50 4.50 - 0.50 1.50 - 0.50 - - - - 1.00 0.50 - - - 1.00 1.00 - - - - - - - - -
....................................................................................................................................................GGGGGTGTAGCTCAT....................................................................................... 15 15 6.87 6.87 1.60 4.80 0.20 - - 0.13 - 0.07 0.07 - - - - - - - - - - - - - - - - -
....................................................................................................................................................GGGGGTGTAGCTaaa....................................................................................... 15 aaa 4.00 0.00 - - 3.00 - - - - 1.00 - - - - - - - - - - - - - - - - - -
..GGTGGGGACAAGAACGGTGGCACCCGGGTGGTGAAGa................................................................................................................................................................................................................... 37 a 4.00 0.00 - - - - - - 4.00 - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................GGGGGTGTAGCTCAaaa..................................................................................... 17 aaa 3.00 0.00 - - - - 1.00 - - - 2.00 - - - - - - - - - - - - - - - - -
....................................................................................................................................................GGGGGTGTAGCTCAatcg.................................................................................... 18 atcg 2.00 0.00 - - - - 2.00 - - - - - - - - - - - - - - - - - - - - -
.TGGTGGGGACAAGAACGGTGGCACCCGt............................................................................................................................................................................................................................. 28 t 2.00 0.00 - - - - - - - - - - - - 1.00 - 1.00 - - - - - - - - - - -
....................................................................................................................................................GGGGGTGTAGCTCggcg..................................................................................... 17 ggcg 2.00 0.00 - - - - - - - 2.00 - - - - - - - - - - - - - - - - - -
.TGGTGGGGACAAGAACGGTGGCACCCGG............................................................................................................................................................................................................................. 28 6 1.33 1.33 - - - - 0.17 - - - - - - - 0.17 - 0.33 - - - 0.33 - - 0.17 - - 0.17 -
.....................................................................................................................................................GGGGTGTAGCTCATctgg................................................................................... 18 ctgg 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
....................................................................................................................................................GGGGGTGTAGCTCgtag..................................................................................... 17 gtag 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................GGGGGTGTAGCTCAaaaa.................................................................................... 18 aaaa 1.00 0.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
....................................................................................................................................................GGGGGTGTAGCTCggc...................................................................................... 16 ggc 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..................................................GTGAGATCTAGTTTGGGTTGCTTTCC.............................................................................................................................................................................. 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.....................................................................GCTTTCCTTGGGGTTAGGGTTGAGG............................................................................................................................................................ 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...............ACGGTGGCACCCGGGTGGTGAAGCTTaa............................................................................................................................................................................................................... 28 aa 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
....................................................................................................................................................GGGGGTGTAGCTaaaa...................................................................................... 16 aaaa 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...GTGGGGACAAGAACGGTGGCACCCGGGggg......................................................................................................................................................................................................................... 30 ggg 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................GGGGGTGTAGCTCgaa...................................................................................... 16 gaa 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
....................................................................................................................................................GGGGGTGTAGCTCgccc..................................................................................... 17 gccc 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..GGTGGGGACAAGAACGGTGGCA.................................................................................................................................................................................................................................. 22 8 0.88 0.88 - - - - 0.12 - - - - - - - - - - - - - - 0.75 - - - - - -
....TGGGGACAAGAACGGTGGCACCCGGGT........................................................................................................................................................................................................................... 27 6 0.83 0.83 - - - - - - - - - - - - 0.17 - 0.33 - - - - - 0.17 - 0.17 - - -
....TGGGGACAAGAACGGTGGCACCCGG............................................................................................................................................................................................................................. 25 6 0.67 0.67 - - - - - - - - - - - - 0.33 - - - - - 0.17 - - - 0.17 - - -
...........................................................................................AGGCTTGTCTGAAAGAGG............................................................................................................................................. 18 2 0.50 0.50 - - - - - - 0.50 - - - - - - - - - - - - - - - - - - -
.TGGTGGGGACAAGAACGGTGGCACCCGGG............................................................................................................................................................................................................................ 29 6 0.50 0.50 - - 0.17 - - - - - - - - - - - - - - - - - 0.17 - - 0.17 - -
...GTGGGGACAAGAACGGTGG.................................................................................................................................................................................................................................... 19 8 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - -
...GTGGGGACAAGAACGGT...................................................................................................................................................................................................................................... 17 8 0.50 0.50 - 0.12 - - - - - - - - - - - 0.38 - - - - - - - - - - - -
....................................................................................................................................................GGGGGTGTAGCTCATAt..................................................................................... 17 t 0.50 137.50 - - - - - - - - - - - - - - - - 0.50 - - - - - - - - -
......GGGACAAGAACGGTGGCACCCGGGTG.......................................................................................................................................................................................................................... 26 6 0.50 0.50 - - - 0.17 - - - - - - - - - - 0.17 - - - 0.17 - - - - - - -
....................................................................................................................................................GGGGGTGTAGCTCATAtt.................................................................................... 18 tt 0.50 137.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - -
....TGGGGACAAGAACGGTGGC................................................................................................................................................................................................................................... 19 10 0.40 0.40 - - - - - 0.20 - - - - - - - 0.20 - - - - - - - - - - - -
.TGGTGGGGACAAGAACGG....................................................................................................................................................................................................................................... 18 8 0.38 0.38 - 0.38 - - - - - - - - - - - - - - - - - - - - - - - -
..GGTGGGGACAAGAACGGTGGCAC................................................................................................................................................................................................................................. 23 8 0.38 0.38 - - - 0.25 - 0.12 - - - - - - - - - - - - - - - - - - - -
..GGTGGGGACAAGAACGGTGGCACC................................................................................................................................................................................................................................ 24 8 0.38 0.38 - - - - - - - - - 0.38 - - - - - - - - - - - - - - - -
....TGGGGACAAGAACGGTGGCACCCGGGTGGTGAAGC................................................................................................................................................................................................................... 35 6 0.33 0.33 - - - - - 0.33 - - - - - - - - - - - - - - - - - - - -
......GGGACAAGAACGGTGGCACCCGGGTGGTGAAG.................................................................................................................................................................................................................... 32 6 0.33 0.33 - 0.33 - - - - - - - - - - - - - - - - - - - - - - - -
.....GGGGACAAGAACGGTGGCACCCGGG............................................................................................................................................................................................................................ 25 6 0.33 0.33 - - - - - 0.33 - - - - - - - - - - - - - - - - - - - -
..........CAAGAACGGTGGCACCCGGGTGGTGAA..................................................................................................................................................................................................................... 27 6 0.33 0.33 - - - - 0.17 - - - - - - - - - - - - - - - - - - - - 0.17
.TGGTGGGGACAAGAACGGTGGCACCCGGa............................................................................................................................................................................................................................ 29 a 0.33 1.33 - - - - - - - - - - - - 0.17 - 0.17 - - - - - - - - - - -
......GGGACAAGAACGGTGGCACCCG.............................................................................................................................................................................................................................. 22 7 0.29 0.29 - - - 0.29 - - - - - - - - - - - - - - - - - - - - - -
..GGTGGGGACAAGAACG........................................................................................................................................................................................................................................ 16 8 0.25 0.25 - - - - - 0.25 - - - - - - - - - - - - - - - - - - - -
...GTGGGGACAAGAACGGTGGCACC................................................................................................................................................................................................................................ 23 8 0.25 0.25 - - - 0.25 - - - - - - - - - - - - - - - - - - - - - -
......................CACCCGGGTGGTGAAGCTTCGAAAAA.......................................................................................................................................................................................................... 26 5 0.20 0.20 - - - - 0.20 - - - - - - - - - - - - - - - - - - - - -
......................CACCCGGGTGGTGAAGCTTCGAAAAATG........................................................................................................................................................................................................ 28 5 0.20 0.20 - - - - - - - - - - - - - - - - - - - - - 0.20 - - - -
...................TGGCACCCGGGTGGTGAAGCTTCGA.............................................................................................................................................................................................................. 25 5 0.20 0.20 - - - - - - - - - - - - - - - - - 0.20 - - - - - - - -
.......................ACCCGGGTGGTGAAGCTTCGAAAA........................................................................................................................................................................................................... 24 5 0.20 0.20 - - - - - - - - - - - - - - - - - 0.20 - - - - - - - -
......GGGACAAGAACGGTGGCA.................................................................................................................................................................................................................................. 18 11 0.18 0.18 - - - - - 0.18 - - - - - - - - - - - - - - - - - - - -
......GGGACAAGAACGGTGGCAC................................................................................................................................................................................................................................. 19 11 0.18 0.18 - - - - - 0.18 - - - - - - - - - - - - - - - - - - - -
.........ACAAGAACGGTGGCACCCGGGTGG......................................................................................................................................................................................................................... 24 6 0.17 0.17 - - - - - - - - - - - - - - - - - - - - 0.17 - - - - -
.............GAACGGTGGCACCCGGGTGGTGAAGCT.................................................................................................................................................................................................................. 27 6 0.17 0.17 - - - - - - - - - - - 0.17 - - - - - - - - - - - - - -
.............GAACGGTGGCACCCGGGTGGTGAAG.................................................................................................................................................................................................................... 25 6 0.17 0.17 - - - - 0.17 - - - - - - - - - - - - - - - - - - - - -
......GGGACAAGAACGGTGGCACCCGGGTGGTGAAGCT.................................................................................................................................................................................................................. 34 6 0.17 0.17 - - - - - 0.17 - - - - - - - - - - - - - - - - - - - -
......GGGACAAGAACGGTGGCACCCGGGTGGTGA...................................................................................................................................................................................................................... 30 6 0.17 0.17 - - - - - - - - - - - - - - - - - - - - 0.17 - - - - -
..GGTGGGGACAAGAACGGTGGCACCCGGG............................................................................................................................................................................................................................ 28 6 0.17 0.17 - 0.17 - - - - - - - - - - - - - - - - - - - - - - - -
....TGGGGACAAGAACGGTGGCACCCGGGTGGTG....................................................................................................................................................................................................................... 31 6 0.17 0.17 - - - - - - - - - - - - - - - - - - - - - - - 0.17 - -
...........AAGAACGGTGGCACCCGGGTGGTGAAGC................................................................................................................................................................................................................... 28 6 0.17 0.17 - - - - - - - - - - - - - - - - - 0.17 - - - - - - - -
.................GGTGGCACCCGGGTGGTGAAGCT.................................................................................................................................................................................................................. 23 6 0.17 0.17 - - - - 0.17 - - - - - - - - - - - - - - - - - - - - -
...GTGGGGACAAGAACGGTGGCACCCGGGTGGTGA...................................................................................................................................................................................................................... 33 6 0.17 0.17 - - - 0.17 - - - - - - - - - - - - - - - - - - - - - -
.....GGGGACAAGAACGGTGGCACCCGGGT........................................................................................................................................................................................................................... 26 6 0.17 0.17 - 0.17 - - - - - - - - - - - - - - - - - - - - - - - -
......GGGACAAGAACGGTGGCACCCGGGT........................................................................................................................................................................................................................... 25 6 0.17 0.17 - - - - - - - - - - - - - - - - - - - - - 0.17 - - - -
...........AAGAACGGTGGCACCCGGGTGGTGAA..................................................................................................................................................................................................................... 26 6 0.17 0.17 - - - - - - - - - - - - - - - - - 0.17 - - - - - - - -
...GTGGGGACAAGAACGGTGGCACCCGGGTGGT........................................................................................................................................................................................................................ 31 6 0.17 0.17 - 0.17 - - - - - - - - - - - - - - - - - - - - - - - -
.TGGTGGGGACAAGAACGGTGGCACCCGGGTGGTGAA..................................................................................................................................................................................................................... 36 6 0.17 0.17 - 0.17 - - - - - - - - - - - - - - - - - - - - - - - -
.....GGGGACAAGAACGGTGGCACCCGGGTGGTGAAG.................................................................................................................................................................................................................... 33 6 0.17 0.17 - - - - - 0.17 - - - - - - - - - - - - - - - - - - - -
..GGTGGGGACAAGAACGGTGGCACCCGG............................................................................................................................................................................................................................. 27 6 0.17 0.17 - - - - - - - - - 0.17 - - - - - - - - - - - - - - - -
....TGGGGACAAGAACGGTGGCACCCGGG............................................................................................................................................................................................................................ 26 6 0.17 0.17 - - - - - - - - - - 0.17 - - - - - - - - - - - - - - -
.......................ACCCGGGTGGTGAAGCTTC................................................................................................................................................................................................................ 19 7 0.14 0.14 - - - - 0.14 - - - - - - - - - - - - - - - - - - - - -
......GGGACAAGAACGGTGGCACCCGG............................................................................................................................................................................................................................. 23 7 0.14 0.14 - - - - - 0.14 - - - - - - - - - - - - - - - - - - - -
..............................TGGTGAAGCTTCGAAAAAT......................................................................................................................................................................................................... 19 7 0.14 0.14 - - - - - - - - - - - - - - - - - 0.14 - - - - - - - -
.TGGTGGGGACAAGAACGGTGGCACC................................................................................................................................................................................................................................ 25 8 0.12 0.12 0.12 - - - - - - - - - - - - - - - - - - - - - - - - -
.TGGTGGGGACAAGAACGGTGGCACCttt............................................................................................................................................................................................................................. 28 ttt 0.12 0.12 - - - - - - - - - - - - - - - - - - - - - - - - 0.12 -
.TGGTGGGGACAAGAACGGT...................................................................................................................................................................................................................................... 19 8 0.12 0.12 - - - - - - - - - - - - - - - - - 0.12 - - - - - - - -
...GTGGGGACAAGAACGGTGGCAC................................................................................................................................................................................................................................. 22 8 0.12 0.12 - - - - - 0.12 - - - - - - - - - - - - - - - - - - - -
..GGTGGGGACAAGAACGGTGGC................................................................................................................................................................................................................................... 21 8 0.12 0.12 - - - - - - - - - - - - - - - - - - - - - 0.12 - - - -
.TGGTGGGGACAAGAACGGTGGCA.................................................................................................................................................................................................................................. 23 8 0.12 0.12 - - - - 0.12 - - - - - - - - - - - - - - - - - - - - -
...GTGGGGACAAGAACGGTG..................................................................................................................................................................................................................................... 18 8 0.12 0.12 - - - - - 0.12 - - - - - - - - - - - - - - - - - - - -
.TGGTGGGGACAAGAACGGTGGCAC................................................................................................................................................................................................................................. 24 8 0.12 0.12 - - - - 0.12 - - - - - - - - - - - - - - - - - - - - -
....TGGGGACAAGAACGGTGGCAC................................................................................................................................................................................................................................. 21 10 0.10 0.10 - - - - - - - - - 0.10 - - - - - - - - - - - - - - - -
.....GGGGACAAGAACGGTGGCAC................................................................................................................................................................................................................................. 20 10 0.10 0.10 - - - - - 0.10 - - - - - - - - - - - - - - - - - - - -
.....GGGGACAAGAACGGTGG.................................................................................................................................................................................................................................... 17 10 0.10 0.10 - - - 0.10 - - - - - - - - - - - - - - - - - - - - - -
.....GGGGACAAGAACGGTGGCA.................................................................................................................................................................................................................................. 19 10 0.10 0.10 - - - - - 0.10 - - - - - - - - - - - - - - - - - - - -
.....GGGGACAAGAACGGTGGC................................................................................................................................................................................................................................... 18 10 0.10 0.10 - - - - - 0.10 - - - - - - - - - - - - - - - - - - - -
......GGGACAAGAACGGTGGCACC................................................................................................................................................................................................................................ 20 10 0.10 0.10 - - - - - 0.10 - - - - - - - - - - - - - - - - - - - -
....TGGGGACAAGAACGGTG..................................................................................................................................................................................................................................... 17 10 0.10 0.10 - - - - - 0.10 - - - - - - - - - - - - - - - - - - - -
.....GGGGACAAGAACGGTG..................................................................................................................................................................................................................................... 16 10 0.10 0.10 - - - 0.10 - - - - - - - - - - - - - - - - - - - - - -
..GGTGGGGACAAGAAC......................................................................................................................................................................................................................................... 15 15 0.07 0.07 - - - - - - - - - - 0.07 - - - - - - - - - - - - - - -
....................................................................................................................................................GGGGGTGTAGCTCATct..................................................................................... 17 ct 0.07 6.87 - - 0.07 - - - - - - - - - - - - - - - - - - - - - - -

Antisense strand
TTGGTGGGGACAAGAACGGTGGCACCCGGGTGGTGAAGCTTCGAAAAATGGTGAGATCTAGTTTGGGTTGCTTTCCTTGGGGTTAGGGTTGAGGCTTGTCTGAAAGAGGCTATGTCAGTCAAGTCTAGTTGGGATAAGCTCTCAGGCTGGGGGTGTAGCTCATAGTGGGACCAGCACACTGGGGTTCTGGCTACTCCATTGCTGGCAAGTGGAAGGTGGGTATTTATCAAACTTGTGGTATTGATGTCTA


 Size Perfect hit Total Norm Perfect Norm mjTestesKO5()
Testes Data. (Zcchc11 testes) 		mjTestesKO8()
Testes Data. (Zcchc11 testes) 		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes) 		mjTestesWT2()
Testes Data. (testes) 		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes) 		mjTestesKO7()
Testes Data. (Zcchc11 testes) 		mjTestesWT4()
Testes Data. (testes) 		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes) 		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes) 		mjTestesKO6()
Testes Data. (Zcchc11 testes) 		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes) 		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes) 		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes) 		mjTestesWT3()
Testes Data. (testes) 		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes) 		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes) 		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes) 		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) 		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes) 		mjTestesWT1()
Testes Data. (testes) 		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes) 		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes) 		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes) 		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes) 		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes) 		SRR014231(GSM319955)
16.5 dpc total. (testes)