| Gene: Tchp | ID: uc008yzx.1_intron_9_0_chr5_115168470_f.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(3) PIWI.ip |
(15) TESTES |
| AGAAAAACAAACTAAACTGACCAGGGCAGTTGGCATGGATGCGAAAGAGCAGTGGTCTGCACTGGGCCTGCGGCTCAGGCCTGCTCTCCATGTATTAGGGTGGACTAGGCTGGGTTGGTAAGGATGCGGCTGTAGCTGGGCTGAGGCTTGGGTCAGGAGGTTTAGACTGAAATGCAAACCTTCTCTTCCCCCTCGGCCAGGTTCTGACCGGGAGGCAGCAGCAGATCCTGGAGAAGATTGAACAGAACCG .....................................................................................................((.((((((((.(((......))).))))).))))).((((((((...(((..(((((((((............)))))))))...))))))))))).................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
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| ........................................................................................................................................TGGGCTGAGGCTTGGGTCAGGAGG.......................................................................................... | 24 | 1 | 8.00 | 8.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ........................................................................................................................................TGGGCTGAGGCTTGGGTCAGGAGGTTaac..................................................................................... | 29 | aac | 4.00 | 1.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................GTTGGCATGGATGCGAAAGAGCAGTG.................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................TGGGCTGAGGCTTGGGTCAGGAGGT......................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - |
| .................................................................................................................................................................................................................................TCCTGGAGAAGATTGAACAGAACCGgct | 28 | gct | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................................................................CTGGGCTGAGGCTTGGGTCAGGAGGTT........................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .................................................................................................................................................................................................................................TCCTGGAGAAGATTGAACAGAACCGgt | 27 | gt | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................TCCTGGAGAAGATTGAACAGAACCG | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................CAGCAGATCCTGGAGAAGATTGAACAGt.... | 28 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................CGGCTGTAGCTGGGCTGgggc....................................................................................................... | 21 | gggc | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................TGGGCTGAGGCTTGGGTCAGGAG........................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................TGGGCTGAGGCTTGGGTCAGGAGGTTT....................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................................................................................................TGGGCTGAGGCTTGGGTCAGGAGGTT........................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................CAGCAGATCCTGGAGAAGATTGAACAGAA... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| AGAAAAACAAACTAAACTGACCAGGGCAGTTGGCATGGATGCGAAAGAGCAGTGGTCTGCACTGGGCCTGCGGCTCAGGCCTGCTCTCCATGTATTAGGGTGGACTAGGCTGGGTTGGTAAGGATGCGGCTGTAGCTGGGCTGAGGCTTGGGTCAGGAGGTTTAGACTGAAATGCAAACCTTCTCTTCCCCCTCGGCCAGGTTCTGACCGGGAGGCAGCAGCAGATCCTGGAGAAGATTGAACAGAACCG .....................................................................................................((.((((((((.(((......))).))))).))))).((((((((...(((..(((((((((............)))))))))...))))))))))).................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
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| ............................................................................................................................................................TTTAGACTGAAATGggga............................................................................ | 18 | ggga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |