| Gene: Usp30 | ID: uc008yzc.1_intron_3_0_chr5_114555861_f.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(13) TESTES |
| TGCTGCGTGCATCTTGCCTGCTCTTTTAAAGCAAGCCCCTGCTGGAGTTGAGGGCACGTCTCCTTCAGTTATTGGGACTCAGAGAAAGCAGAAAGCATTCTGCCCAGTAAGGGTTAGGTCTGTCTGCTGCACGTGGCCTGGGTTCTGACCCTAGCCTGGCCTTGTGAACCTGTCTTCAAGGAAGCTTTGTCCTTTGATAGGATGCTCACGAGCTGTTTCATGTCATCACCTCATCACTGGAGGACGAGAG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
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| ...............................................................TTCAGTTATTGGGACTCAGAGAAAGC................................................................................................................................................................. | 26 | 1 | 6.00 | 6.00 | 5.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................TTGGGACTCAGAGAAAGCAGAAAGCA......................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TAGCCTGGCCTTGTGAACCTGTCTTCAAG...................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ............................................................TCCTTCAGTTATTGGGACT........................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................TCAGTTATTGGGACTCAGAGAAAGCAGA.............................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................TTGGGACTCAGAGAAAGCAGAAAGCATTC...................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................................TTGGGACTCAGAGAAAGCAGAAAGCAT........................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................TTTTAAAGCAAGCCCCTGCTGGAGTTG........................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................TCAGTTATTGGGACTCAGAGAAAGCA................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ............................................................TCCTTCAGTTATTGGGACTCAGAGA..................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................CAGTTATTGGGACTCAGAGAAAGCAG............................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................................TGGGACTCAGAGAAAGCAGAAAGCATTCTGCC.................................................................................................................................................. | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................TGCTGGAGTTGAGGGCACGTCTCCTT......................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................TATTGGGACTCAGAGAAAGCAGAAAGCAT........................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ....................................................................TTATTGGGACTCAGAGAAAGCA................................................................................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................TAAGGGTTAGGTCTGTCTGCTGCACG..................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| TGCTGCGTGCATCTTGCCTGCTCTTTTAAAGCAAGCCCCTGCTGGAGTTGAGGGCACGTCTCCTTCAGTTATTGGGACTCAGAGAAAGCAGAAAGCATTCTGCCCAGTAAGGGTTAGGTCTGTCTGCTGCACGTGGCCTGGGTTCTGACCCTAGCCTGGCCTTGTGAACCTGTCTTCAAGGAAGCTTTGTCCTTTGATAGGATGCTCACGAGCTGTTTCATGTCATCACCTCATCACTGGAGGACGAGAG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
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