| Gene: Svop | ID: uc008yzb.1_intron_0_0_chr5_114478474_r.5p | SPECIES: mm9 |
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(3) OTHER.mut |
(1) OVARY |
(3) PIWI.ip |
(1) PIWI.mut |
(11) TESTES |
| GCAGCGGCATGGCGAGAGTGGGCGCTCTCATTACTCCGTTCATAGCTCAGGCAAGTGTTGCCCCAGATACAGATCCAGGTAGCAGCCGGCTGTGACTATAGATCGGACAGCATTTCCCAGCAACTGACCCCAGGAGGGAACAGTGTCTCGGAAGAATAAAAGGCCCAAGGCCAACAGGCAGGGACTCAGACAAGCCTGGAATAATATTCAAAGTTGCTCAGTCTTCCCTGAGCAGAAAAGAAAGGACTCA |
Size | Perfect hit | Total Norm | Perfect Norm | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesWT2() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesWT3() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014234(GSM319958) Ovary total. (ovary) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................TATAGATCGGACAGCATTTCCCAGC................................................................................................................................. | 25 | 1 | 6.00 | 6.00 | 1.00 | 2.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................TATAGATCGGACAGCATTTCCCAGCA................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................TATAGATCGGACAGCATTTCCCAGCAA............................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................CAGTGTCTCGGAAGAATAAAAGGCCC.................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................................ACAGATCCAGGTAGCAGCCGGCTGT............................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ................................................................................................TATAGATCGGACAGCATTTCCCAGCAAC.............................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .............................................................................................GACTATAGATCGGACAGCATTTCCCAG.................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................................................CAGCCGGCTGTGACTATAGATCGGAC.............................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................AGCAGCCGGCTGTGACTATAGATCGGA............................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................TAGATCGGACAGCATTTCCCAGCAA............................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TGACCCCAGGAGGGAACAGTGTCTC..................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................TAGCAGCCGGCTGTGACTATAGATC.................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................................................................................................AGATCGGACAGCATTTCCCAGCAACTG............................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................GACTATAGATCGGACAGCATTTCCCA................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ............................................................................AGGTAGCAGCCGGCTGTGACTATAGATC.................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................GTGACTATAGATCGGACAGCATTTCCCAGC................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................AGATCGGACAGCATTTCCCAGCAACTGACC......................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................TGACTATAGATCGGACAGCATTTCCCAGC................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................TAGCAGCCGGCTGTGACTATAGATCGGAa.............................................................................................................................................. | 29 | a | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................TAGCTCAGGCAAGTGTTGCCCCAGATACA................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| GCAGCGGCATGGCGAGAGTGGGCGCTCTCATTACTCCGTTCATAGCTCAGGCAAGTGTTGCCCCAGATACAGATCCAGGTAGCAGCCGGCTGTGACTATAGATCGGACAGCATTTCCCAGCAACTGACCCCAGGAGGGAACAGTGTCTCGGAAGAATAAAAGGCCCAAGGCCAACAGGCAGGGACTCAGACAAGCCTGGAATAATATTCAAAGTTGCTCAGTCTTCCCTGAGCAGAAAAGAAAGGACTCA |
Size | Perfect hit | Total Norm | Perfect Norm | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesWT2() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesWT3() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014234(GSM319958) Ovary total. (ovary) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................................................GCCTGGAATAATATTCAAAGTTGCTCA.............................. | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................CATTACTCCGTTCATAGCTCAGGCAA.................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................GCGCTCTCATTACTCCGTTCATAGCTCA......................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................TTACTCCGTTCATAGCTCAGGCAAacag.................................................................................................................................................................................................... | 28 | acag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..................................................................................................................................CAGGAGGGAACAGTGTCTCGGAAGAATA............................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |