| Gene: Asphd2 | ID: uc008yth.1_intron_1_0_chr5_112815893_r.5p | SPECIES: mm9 |
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(4) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(18) TESTES |
| GATCACGGAGCACTACGGACCCACAAACATCCGCATCCGATGCCACCTAGGTATGTGGAGGGGCGGAGTCCCAGCATGCACAGTCACAGAAGCCTTGAGTTAAAAGGAGCCTTTGCCTCTCGGGTGCTTTGATCAAATACCGAAGGCATTCAGCTGGGTGCAGTGCCGGCTCACACCTGCAGTCCAGACACTTAAGAGGCTGAGGCAGAAGGGTCAAGGCTTGAAGGGCTAGCCTGCACTATTTGTGTGT .................................................(((((.(((.(((((...)))))................(((((((((((...((((....))))....)))))).)))))..))).)))))............................................................................................................. ..........................................43..................................................................................................143......................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................TAGGTATGTGGAGGGGCGGAGTCCCAGC............................................................................................................................................................................... | 28 | 1 | 15.00 | 15.00 | 4.00 | 3.00 | 1.00 | 2.00 | 1.00 | - | 1.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - |
| ............................................................................................................................................................................................CACTTAAGAGGCTGAGGCAGAAGGGT.................................... | 26 | 1 | 4.00 | 4.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................................................................................................................CGGGTGCTTTGATCAAATA............................................................................................................... | 19 | 1 | 3.00 | 3.00 | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................CACTTAAGAGGCTGAGGCAGAAGGGTC................................... | 27 | 1 | 3.00 | 3.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................GACACTTAAGAGGCTGAGGCAGAAGG...................................... | 26 | 1 | 3.00 | 3.00 | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................CGGGTGCTTTGATCAAATACCGAAGGC....................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | - | - | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................TGATCAAATACCGAAGGCATTCAGCTG.............................................................................................. | 27 | 1 | 3.00 | 3.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .................................................................................................................................................................................TGCAGTCCAGACACTTAAGAGGCTGA............................................... | 26 | 1 | 3.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TTGAAGGGCTAGCCTGCACTATTTGT.... | 26 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 2.00 | - | - | - | - | - |
| ...............................................TAGGTATGTGGAGGGGCGGAGTCCCAGCA.............................................................................................................................................................................. | 29 | 1 | 3.00 | 3.00 | - | - | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................TGCACAGTCACAGAAGCCTTGAGTTA.................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TTTGATCAAATACCGAAGGCATTCAGCT............................................................................................... | 28 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................TAGGTATGTGGAGGGGCGGAGTCCCAt................................................................................................................................................................................ | 27 | t | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - |
| ...............................................TAGGTATGTGGAGGGGCGGAGTCCCA................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................TGATCAAATACCGAAGGCATTCAGCTGG............................................................................................. | 28 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TAAAAGGAGCCTTTGCCTCTCGGGTG............................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................................................................................................TTTGATCAAATACCGAAGGCATTCAGC................................................................................................ | 27 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............TACGGACCCACAAACATCCGCATCCGATG................................................................................................................................................................................................................ | 29 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................TAGGTATGTGGAGGGGCGGAGTCCCAGt............................................................................................................................................................................... | 28 | t | 2.00 | 1.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................ACCTAGGTATGTGGAGGGGCGGAGTC.................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TGAGTTAAAAGGAGCCTTTGCCTC................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...CACGGAGCACTACGGACCCACAAACATC........................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................CCTGCAGTCCAGACACTTAAGAGGCTGA............................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TAAAAGGAGCCTTTGCCTCTCGGGTGt........................................................................................................................... | 27 | t | 1.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TAAAAGGAGCCTTTGCCTCTCGGGT............................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TTGAAGGGCTAGCCTGCACTATTTGTG... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................TAAGAGGCTGAGGCAGAAGGGTCAAt................................ | 26 | t | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................TAGGTATGTGGAGGGGCGGAGTCCCAGg............................................................................................................................................................................... | 28 | g | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................TGCACAGTCACAGAAGCCTTGAGTTAAAA................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................TAAGAGGCTGAGGCAGAAGGGTCAA................................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................AGAAGCCTTGAGTTAAAAGGAGCCTT......................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................CAGAAGCCTTGAGTTAAAAGGAGCCT.......................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................TAGGTATGTGGAGGGGCGGAGTCCC.................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................TAGGTATGTGGAGGGGCGGAGTCCCAG................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................................................GAAGCCTTGAGTTAAAAGGAGCCTTTGCCTC................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................ACACTTAAGAGGCTGAGGCAGAAGGGTC................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................ACCTAGGTATGTGGAGGGGCGGAGT..................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................................................................TAAGAGGCTGAGGCAGAAGGGTCAAtt............................... | 27 | tt | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................AAGGGTCAAGGCTTGAAGGGCTAGC................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................GTCCAGACACTTAAGAGGCTGAGGCAG.......................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TGCAGTCCAGACACTTAAGAGGCTGAGGC............................................ | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................CGGGTGCTTTGATCAAATACCGAAGGCA...................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................TCGGGTGCTTTGATCAAATACCGAAGGC....................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................TAGGTATGTGGAGGGGCGGAGTCCCc................................................................................................................................................................................. | 26 | c | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TAAAAGGAGCCTTTGCCTCTCGGGTGC........................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................AGAAGGGTCAAGGCTTGAAGGGCTAGC................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................TGAGGCAGAAGGGTCAAGGCTTGAAGGt...................... | 28 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GATCACGGAGCACTACGGACCCACAAACATCCGCATCCGATGCCACCTAGGTATGTGGAGGGGCGGAGTCCCAGCATGCACAGTCACAGAAGCCTTGAGTTAAAAGGAGCCTTTGCCTCTCGGGTGCTTTGATCAAATACCGAAGGCATTCAGCTGGGTGCAGTGCCGGCTCACACCTGCAGTCCAGACACTTAAGAGGCTGAGGCAGAAGGGTCAAGGCTTGAAGGGCTAGCCTGCACTATTTGTGTGT .................................................(((((.(((.(((((...)))))................(((((((((((...((((....))))....)))))).)))))..))).)))))............................................................................................................. ..........................................43..................................................................................................143......................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................................TGCAGTCCAGACACT.......................................................... | 15 | 9 | 0.22 | 0.22 | - | - | - | - | - | - | - | - | - | - | - | - | 0.22 | - | - | - | - | - |