| Gene: Pds5a | ID: uc008xny.1_intron_9_0_chr5_66029142_r.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(2) PIWI.ip |
(2) PIWI.mut |
(10) TESTES |
| GAACGTACCCCTCAGGATTCTTGTTAAAGTCTCTGAGTAAAAGTAACTGTAGTTGGGGCTAAATGATGTAATTTATATTCCAAGTGTTACAGCTAGCGTTTGCACACCAGAAGTTTACATTCTATTTATTGAAAGAAAACTCTTTTTTAAATAGAATAGAGCTGTTGTCTGTATTCCTAAAGGTGTATCTATTCCTCCAGGTTCTGTCTTTCACACATCCTACCTCGTTCCACTCTGCAGAGACATATGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR042485(GSM539877) mouse testicular tissue [09-002]. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................ATTCTATTTATTGAAAGAAAACTCTTTTTTAAATAGAATAGAGCTGTTGTCT................................................................................ | 52 | 1 | 47.00 | 47.00 | 47.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................TCCTACCTCGTTCCACTCTGCAGAGACATA... | 30 | 1 | 3.00 | 3.00 | - | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - |
| .......................................AAAGTAACTGTAGTTGGGGCTA............................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................................................................................................................................................................................................................TACCTCGTTCCACTCTGCAGAGACATAT.. | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................TCGTTCCACTCTGCAGAGACATATGA | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................................................................................................................................................TCCTACCTCGTTCCACTCTGCAGAGACA..... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| .................................................TAGTTGGGGCTAAAgaa........................................................................................................................................................................................ | 17 | gaa | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| GAACGTACCCCTCAGGATTCTTGTTAAAGTCTCTGAGTAAAAGTAACTGTAGTTGGGGCTAAATGATGTAATTTATATTCCAAGTGTTACAGCTAGCGTTTGCACACCAGAAGTTTACATTCTATTTATTGAAAGAAAACTCTTTTTTAAATAGAATAGAGCTGTTGTCTGTATTCCTAAAGGTGTATCTATTCCTCCAGGTTCTGTCTTTCACACATCCTACCTCGTTCCACTCTGCAGAGACATATGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR042485(GSM539877) mouse testicular tissue [09-002]. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................................................................ACTCTGCAGAGACATttgg.... | 19 | ttgg | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........................................................................TTCCAAGTGTTACAGCTgt............................................................................................................................................................ | 19 | gt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - |
| ...........................................................................................................................................................................................................................CTACCTCGTTCCACT................ | 15 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | 0.33 |