| Gene: Anapc4 | ID: uc008xkw.1_intron_18_0_chr5_53248467_f.3p | SPECIES: mm9 |
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(4) PIWI.ip |
(1) PIWI.mut |
(15) TESTES |
| GTAACCATTCTGACCGTCCAACTGTTTAAAGTTTGTTTTCTTGACATTTAACAGACTTTTGTGTCTTCACTTTTTAAACAGTGGACTTGCAGAAAATTTGTCAGTAAAGCACAAAAGCACAAAAACATTCTAAATAGAAAAAAAGTGATTTGGTGAGCTTTATTCTTTTCTGAATTGCAACGGTCCACTCTTACTTGTAGTATTTGAAAGATGAAGACGACGACCTTGTGTCACCCCCTAACACAGAAGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) |
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| .......................................................................................................................................AGAAAAAAAGTGATTTGGTGAGCTTTATTCTTTTCTGAATTGCAACGGTCCA............................................................... | 52 | 1 | 60.00 | 60.00 | 60.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TGAAAGATGAAGACGACGACCTTGTG.................... | 26 | 1 | 5.00 | 5.00 | - | 3.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TGAAAGATGAAGACGACGACCTTGTGTC.................. | 28 | 1 | 4.00 | 4.00 | - | 2.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................................................................................................................................................................................TTTGAAAGATGAAGACGACGACCTTGT..................... | 27 | 1 | 3.00 | 3.00 | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | 1.00 | - | - |
| ....................................................................................................................................................................................................GTAGTATTTGAAAGATGAAGACG............................... | 23 | 1 | 3.00 | 3.00 | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TGAAAGATGAAGACGACGACCTTGTGT................... | 27 | 1 | 3.00 | 3.00 | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................ACAGTGGACTTGCAGAAA........................................................................................................................................................... | 18 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TTGAAAGATGAAGACGACGACCTTGTG.................... | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TTGAAAGATGAAGACGACGACCTTGTGTC.................. | 29 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................ATGAAGACGACGACCTTGTGTCACCCCCa........... | 29 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TGAAAGATGAAGACGACGACCTTGTGTCAC................ | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................AGATGAAGACGACGACCTTGTGTCACCCCC............ | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TTTGAAAGATGAAGACGACGACCTTGTGT................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ......................................................................................................................................................................................................AGTATTTGAAAGATGAAGACGACGACCT........................ | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TTTGAAAGATGAAGACGACGACCTTG...................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGAAGACGACGACCTTGTGTCACCCCCT........... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................AAGATGAAGACGACGACCTTGTGTCACCC.............. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................GATGAAGACGACGACCTTGTG.................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................................................................................................................................................................................................TAGTATTTGAAAGATGAAGACGACGACC......................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TGAAAGATGAAGACGACGACCTTGT..................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................................................................................................................................................AAGATGAAGACGACGACCTTGTGTCA................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TTGAAAGATGAAGACGACGACCT........................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TGAAAGATGAAGACGAC............................. | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................................................................................................................................................TTTGAAAGATGAAGACGACGACCTTGTGTC.................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................TATTTGAAAGATGAAGACGACGACCTT....................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GTATTTGAAAGATGAAGACGACGACC......................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................AAAGATGAAGACGACGACCTTGTGTCACC............... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| GTAACCATTCTGACCGTCCAACTGTTTAAAGTTTGTTTTCTTGACATTTAACAGACTTTTGTGTCTTCACTTTTTAAACAGTGGACTTGCAGAAAATTTGTCAGTAAAGCACAAAAGCACAAAAACATTCTAAATAGAAAAAAAGTGATTTGGTGAGCTTTATTCTTTTCTGAATTGCAACGGTCCACTCTTACTTGTAGTATTTGAAAGATGAAGACGACGACCTTGTGTCACCCCCTAACACAGAAGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) |
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