| Gene: Grk4 | ID: uc008xcz.1_intron_14_0_chr5_35094917_f.5p | SPECIES: mm9 |
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(1) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(1) TDRD1.ip |
(17) TESTES |
| CCATTCTCAGACCAAAGAGAAACTTCTTCCGTAGACTCTTCAGAAGAACGGTAAAAAAACAAACAAACAAACAAACAAAAACAAAAAACAAACTCTTTTGCAAAAGTAAACTATTGTGGCTGGGGCTGTTGCTTAGGGTAGGACATTTGCATAGTAGAAACAAGGACTTGGGGTATGTCCATGTGTATTTACACCCCCCCCTCCAATATGTACGTATATATAGCAAAAGGAAAATGTTTTCTAAGTAAAA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) |
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| .....................................................................................AAACAAACTCTTTTGCAAAAGTAAACTATTGTGGCTGGGGCTGTTGCTTAGG................................................................................................................. | 52 | 1 | 74.00 | 74.00 | 74.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TTCTTCCGTAGACTCTTCAGAAGAACG........................................................................................................................................................................................................ | 27 | 1 | 20.00 | 20.00 | - | 6.00 | 6.00 | 4.00 | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................ACTTCTTCCGTAGACTCTTCAGAAGAAC......................................................................................................................................................................................................... | 28 | 1 | 11.00 | 11.00 | - | 3.00 | 2.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................CTTCTTCCGTAGACTCTTCAGAAGAACG........................................................................................................................................................................................................ | 28 | 1 | 7.00 | 7.00 | - | 1.00 | 2.00 | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .......................TTCTTCCGTAGACTCTTCAGAAGAACGt....................................................................................................................................................................................................... | 28 | t | 5.00 | 20.00 | - | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................CTTCTTCCGTAGACTCTTCAGAAGAAC......................................................................................................................................................................................................... | 27 | 1 | 5.00 | 5.00 | - | 1.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................TTCCGTAGACTCTTCAGAAGAACGGgct.................................................................................................................................................................................................... | 28 | gct | 4.00 | 0.00 | - | - | 2.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................TTCTTCCGTAGACTCTTCAGAAGAAC......................................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................TTCCGTAGACTCTTCAGAAGAACGGgc..................................................................................................................................................................................................... | 27 | gc | 3.00 | 0.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................CGTAGACTCTTCAGAAGAACGGgctg................................................................................................................................................................................................... | 26 | gctg | 3.00 | 0.00 | - | 1.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................ACTTCTTCCGTAGACTCTTCAGAAGA........................................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................TTCTTCCGTAGACTCTTCAGAAGAACGa....................................................................................................................................................................................................... | 28 | a | 3.00 | 20.00 | - | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................ACTTCTTCCGTAGACTCTTCAGAAGAACG........................................................................................................................................................................................................ | 29 | 1 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TCTTCCGTAGACTCTTCAGAAGAACGGgc..................................................................................................................................................................................................... | 29 | gc | 2.00 | 0.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................CTTCTTCCGTAGACTCTTCAGAAGAA.......................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TCTTCCGTAGACTCTTCAGAAGAACGGgct.................................................................................................................................................................................................... | 30 | gct | 2.00 | 0.00 | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................GTAGACTCTTCAGAAGAAC......................................................................................................................................................................................................... | 19 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .......................TTCTTCCGTAGACTCTTCAGAAGAACGG....................................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................CCGTAGACTCTTCAGAAGAA.......................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................TTCCGTAGACTCTTCAGAAGAACGaat..................................................................................................................................................................................................... | 27 | aat | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................CTTCTTCCGTAGACTCTTCAGAAGAACGGg...................................................................................................................................................................................................... | 30 | g | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................AACTTCTTCCGTAGACTCTTCAGAAG............................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................ACTTCTTCCGTAGACTCTTCAGAAGAA.......................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................TCCGTAGACTCTTCAGAAGAACGGgc..................................................................................................................................................................................................... | 26 | gc | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................CTTCTTCCGTAGACTCTTCAGAAGAccg........................................................................................................................................................................................................ | 28 | ccg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .................................................................................................................................................TTTGCATAGTAGAAACAAGGACTTGGGGTA........................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..................................................................................................................................................TTGCATAGTAGAAACAAGGACTTG................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .......................TTCTTCCGTAGACTCTTCAGAAGAACGGT...................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TTCTTCCGTAGACTCTTCAGAAGAACGtt...................................................................................................................................................................................................... | 29 | tt | 1.00 | 20.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................TTCCGTAGACTCTTCAGAAGAACGaaaa.................................................................................................................................................................................................... | 28 | aaaa | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................AAACTTCTTCCGTAGACTCTTCAGAAG............................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| CCATTCTCAGACCAAAGAGAAACTTCTTCCGTAGACTCTTCAGAAGAACGGTAAAAAAACAAACAAACAAACAAACAAAAACAAAAAACAAACTCTTTTGCAAAAGTAAACTATTGTGGCTGGGGCTGTTGCTTAGGGTAGGACATTTGCATAGTAGAAACAAGGACTTGGGGTATGTCCATGTGTATTTACACCCCCCCCTCCAATATGTACGTATATATAGCAAAAGGAAAATGTTTTCTAAGTAAAA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) |
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