| Gene: 0610009O03Rik | ID: uc008xct.1_intron_7_0_chr5_34978181_r | SPECIES: mm9 |
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(7) OTHER.mut |
(1) PIWI.mut |
(17) TESTES |
| CAGCCATTGTCGCTGACCTGGGCTCACCTCCAACCCGCAGCCAAGGCATGGTGAGTGAACAGACCTAGGGAACGGGGATTGATGTCTGGGCTTCAGACTCCATGCCTAGCTCAGGTCTTTTCCCTAGGCAGTCATCGGGGTAGCCTTCTCCTTGGCCTTTACTCTGGGTCCCATGCT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................AACGGGGATTGATGTCTGGGCTTCAGt................................................................................ | 27 | t | 7.00 | 0.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................GTGAGTGAACAGACCTAGGGAACGGGG.................................................................................................... | 27 | 1 | 6.00 | 6.00 | - | 2.00 | - | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................AACGGGGATTGATGTCTGGGCTTt................................................................................... | 24 | t | 3.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 |
| ..................................................GTGAGTGAACAGACCTAGGGAACGGGGA................................................................................................... | 28 | 1 | 3.00 | 3.00 | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - |
| ......................................................................AACGGGGATTGATGTCTGGGCTT.................................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ....................................................GAGTGAACAGACCTAGGGAACGG...................................................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................AACGGGGATTGATGTCTGGGCTa.................................................................................... | 23 | a | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................AACGGGGATTGATGTCTGGGCT..................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......TTGTCGCTGACCTGGGCTCACCTCCA................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................GTGAGTGAACAGACCTAGGGAACGGGc.................................................................................................... | 27 | c | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................AACGGGGATTGATGTCTGGGCTTtt.................................................................................. | 25 | tt | 1.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................GGGGATTGATGTCTGGGCTTC................................................................................... | 21 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................AACGGGGATTGATGTCTGG........................................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................ACCTAGGGAACGGGGATTGATGTCTG......................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................GGGATTGATGTCTGGGCTTCAG................................................................................. | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TGAGTGAACAGACCTAGGGAACGGGGA................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................AACGGGGATTGATGTCTGGGCTTat.................................................................................. | 25 | at | 1.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................AACGGGGATTGATGTCTGGGCTaa................................................................................... | 24 | aa | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................ACGGGGATTGATGTCTGGGCTat................................................................................... | 23 | at | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................AGTGAACAGACCTAGG............................................................................................................ | 16 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| CAGCCATTGTCGCTGACCTGGGCTCACCTCCAACCCGCAGCCAAGGCATGGTGAGTGAACAGACCTAGGGAACGGGGATTGATGTCTGGGCTTCAGACTCCATGCCTAGCTCAGGTCTTTTCCCTAGGCAGTCATCGGGGTAGCCTTCTCCTTGGCCTTTACTCTGGGTCCCATGCT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................TCCAACCCGCAGCCAAGGCAT................................................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...................................................................................................................................................CTCCTTGGCCTTTACTCTGGGTCCCA.... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |