| Gene: Whsc2 | ID: uc008xbn.1_intron_0_0_chr5_34241559_r | SPECIES: mm9 |
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(6) OTHER.mut |
(4) PIWI.ip |
(18) TESTES |
| CACTCGGCCGGAGAAGGCCCTCATCCTGGGCTTCATGGCTGGCTCTCGAGGTACGGTCTGTGCTAATGCTAAGCTTGGGAGGTGCCCCTCATGGGTTGGGGGATGGGTTGCTTGGCCCTAGGCACCTGCCCAGCAGTCCCTGCTCCCTACAGAGAACCCATGCCCGGAGCAGGGGGATGTGATCCAGATCAAGCTCAGTGAA ..............................................................................................((.(((((..((((((((.(((...((....))))).))))).)))..))))).)).................................................... ..........................................................................................91...........................................................152................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................TTGGGGGATGGGTTGCTTGGC...................................................................................... | 21 | 1 | 6.00 | 6.00 | - | - | 1.00 | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 |
| ...............................................................................................TTGGGGGATGGGTTGCTTGGa...................................................................................... | 21 | a | 4.00 | 3.00 | - | - | - | - | 1.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................GGTTGGGGGATGGGTTGCTTGGt...................................................................................... | 23 | t | 3.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TTGGGGGATGGGTTGCTTGG....................................................................................... | 20 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................TGGGGGATGGGTTGCTTGGCtt.................................................................................... | 22 | tt | 2.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................CATGGCTGGCTCTCGAG........................................................................................................................................................ | 17 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TTGGGGGATGGGTTGCTTGGCttt................................................................................... | 24 | ttt | 2.00 | 6.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................GTTGGGGGATGGGTTGCTTGGCaat................................................................................... | 25 | aat | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - |
| ...............................................................................................TTGGGGGATGGGTTGCTTGGCaa.................................................................................... | 23 | aa | 1.00 | 6.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................TTGGGGGATGGGTTGCTTGGt...................................................................................... | 21 | t | 1.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................TGGGGGATGGGTTGCTTGG....................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................GTTGGGGGATGGGTTGCTTGGCt..................................................................................... | 23 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................GGTTGGGGGATGGGTTGCTTGa....................................................................................... | 22 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................TGGGGGATGGGTTGCTTGGC...................................................................................... | 20 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................TGGGGGATGGGTTGCTTtgct..................................................................................... | 21 | tgct | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................CCTGGGCTTCATGGCTGGCTCTCGAG........................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................TCATGGCTGGCTCTCGAG........................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .............................................................................................GGTTGGGGGATGGGTTGCTTGGCt..................................................................................... | 24 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................................................TGGGGGATGGGTTGCTTGGCaat................................................................................... | 23 | aat | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................GTTGGGGGATGGGTTGCTTGa....................................................................................... | 21 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TTGGGGGATGGGTTGCTTG........................................................................................ | 19 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................CCAGCAGTCCCTGCTCCCTAC.................................................... | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................GGTTGGGGGATGGGTTGCTTGGa...................................................................................... | 23 | a | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................CCAGCAGTCCCTGCTCCCTACAG.................................................. | 23 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TTGGGGGATGGGTTGCTTGGCa..................................................................................... | 22 | a | 1.00 | 6.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................TGGGGGATGGGTTGCTTGGCttga.................................................................................. | 24 | ttga | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TTGGGGGATGGGTTGCTTGGCtat................................................................................... | 24 | tat | 1.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................ATCCTGGGCTTCATGGCTGG................................................................................................................................................................ | 20 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TTGGGGGATGGGTTGCTTGa....................................................................................... | 20 | a | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TTGGGGGATGGGTTGCTTGGaat.................................................................................... | 23 | aat | 1.00 | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................TGGGGGATGGGTTGCTTGGCttta.................................................................................. | 24 | ttta | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .....................CATCCTGGGCTTCATGG.................................................................................................................................................................... | 17 | 6 | 0.17 | 0.17 | - | - | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CACTCGGCCGGAGAAGGCCCTCATCCTGGGCTTCATGGCTGGCTCTCGAGGTACGGTCTGTGCTAATGCTAAGCTTGGGAGGTGCCCCTCATGGGTTGGGGGATGGGTTGCTTGGCCCTAGGCACCTGCCCAGCAGTCCCTGCTCCCTACAGAGAACCCATGCCCGGAGCAGGGGGATGTGATCCAGATCAAGCTCAGTGAA ..............................................................................................((.(((((..((((((((.(((...((....))))).))))).)))..))))).)).................................................... ..........................................................................................91...........................................................152................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........AAGGCCCTCATCCTGGGtt............................................................................................................................................................................ | 19 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........AAGGCCCTCATCCTGGtt............................................................................................................................................................................. | 18 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |