| Gene: Ift172 | ID: uc008wyb.1_intron_8_0_chr5_31559045_r | SPECIES: mm9 |
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(5) PIWI.ip |
(2) PIWI.mut |
(18) TESTES |
| ATGTGGAGCAGGGCCAGTGGGATAAATGCATTGAAACAGCTACCAAGCAGGTACTGCGCTCCCTCCCTGCTTCTGAGCTTCCCACCTCTTAACTCCACCAGTGGCCAATCTGCAAAGGCCCCTACTGAACATCAGTCTTTGGTAACTCTGATACTATGGTCAGAACTGTACGTGCCCTTTACTCCCTGAACAAATCCCTGGTCTCTTGCTGCCAGTTCTTATTGATCTGAGCCTTGTCCATGTCCTCCCTCCCAAACTCCCAAACAGAACTACAAGATTCTGCACAAGTATGTGGCTTTGTATGCAACTCATCTGAT .........................................................................................................................................................................(((((.......(((...((.(((....(((((........)))))......))).)).))).......))))).......................................................................... .......................................................................................................................................................................168................................................................................................267................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT3() Testes Data. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................TGGCCAATCTGCAAAGGCCCCTACTGAACATCAGTCTTTGGTAACTCTGATA.................................................................................................................................................................... | 52 | 1 | 42.00 | 42.00 | 42.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................ACTACAAGATTCTGCACAAGTATGTGGCTT................... | 30 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................TACAAGATTCTGCACAAGTATGTGGCTT................... | 28 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................AACTACAAGATTCTGCACAAGTATGTGGCTT................... | 31 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................AGTATGTGGCTTTGTATGCAA.......... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...........................................................................................................................ACTGAACATCAGTCTTTGGTAACTCT........................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .............................................................................................................................................................................................................................................................................CTACAAGATTCTGCACAAG............................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......GCAGGGCCAGTGGGATAAATGCATTGAAA......................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ............................................................................................................................................................................................................................................................................ACTACAAGATTCTGC.................................. | 15 | 5 | 0.20 | 0.20 | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ATGTGGAGCAGGGCCAGTGGGATAAATGCATTGAAACAGCTACCAAGCAGGTACTGCGCTCCCTCCCTGCTTCTGAGCTTCCCACCTCTTAACTCCACCAGTGGCCAATCTGCAAAGGCCCCTACTGAACATCAGTCTTTGGTAACTCTGATACTATGGTCAGAACTGTACGTGCCCTTTACTCCCTGAACAAATCCCTGGTCTCTTGCTGCCAGTTCTTATTGATCTGAGCCTTGTCCATGTCCTCCCTCCCAAACTCCCAAACAGAACTACAAGATTCTGCACAAGTATGTGGCTTTGTATGCAACTCATCTGAT .........................................................................................................................................................................(((((.......(((...((.(((....(((((........)))))......))).)).))).......))))).......................................................................... .......................................................................................................................................................................168................................................................................................267................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT3() Testes Data. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................................................................................................................TCCCAAACTCCCAAACAGAACTACAA.......................................... | 26 | 1 | 5.00 | 5.00 | - | 1.00 | - | 1.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TCTTGCTGCCAGTTCTTATTGATCTGA....................................................................................... | 27 | 1 | 4.00 | 4.00 | - | 1.00 | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................CCTCCCAAACTCCCAAACAGAACTA............................................. | 25 | 1 | 3.00 | 3.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..........................................................................................................................................................................................................CTCTTGCTGCCAGTTCTTATTGATCTGA....................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................CTTGCTGCCAGTTCTTATTGATCTGA....................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................CACCTCTTAACTCCACCAGTGGCCAA................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGTCTCTTGCTGCCAGTTCTTATTGA............................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................TCTGCAAAGGCCCCTACTGAACATCA....................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................TCCCTCCCAAACTCCCAAACAGAACTA............................................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................CCCTGGTCTCTTGCTGCCAGTTCTTA................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................GCCAGTTCTTATTGATCTGAGCCTTGTCCA............................................................................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................TAACTCCACCAGTGGCCAATCTGCAA.......................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................................TAACTCCACCAGTGGCCAATCTGCAAt.......................................................................................................................................................................................................... | 27 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................................................................................................................CTTGCTGCCAGTTCTTATTGATCTGAg....................................................................................... | 27 | g | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................ACTCCCTGAACAAATCCCTGGTCTCTT.............................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................CAGAACTGTACGTGCCCTTTACTCCCt................................................................................................................................... | 27 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................CAGTTCTTATTGATCTGAGCCTTGTCCA............................................................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................CCTCCCTGCTTCTGAGCTTCCCACCTCTTA.................................................................................................................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................CTGCAAAGGCCCCTACTGAACATCAt....................................................................................................................................................................................... | 26 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................ACTGTACGTGCCCTTTACTCCCTGAACA............................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................CCTCTTAACTCCACCAGTGGCCAATC............................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................TTAACTCCACCAGTGGCCAATCTGCA........................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................TCCACCAGTGGCCAATCTGCAA.......................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................AAACAGAACTACAAGATTCTGCACAAGTA........................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................ATCAGTCTTTGGTAACTCTGATACTA................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................................................................................................................................................................TGTACGTGCCCTTTACTCCCTGAACAa............................................................................................................................. | 27 | a | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |