| Gene: 9430057O19Rik | ID: uc008wwd.1_intron_3_0_chr5_31194364_f | SPECIES: mm9 |
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(1) OTHER.ip |
(4) OTHER.mut |
(3) PIWI.ip |
(16) TESTES |
| TATTTCCTGATCTCGGCACTCCCCGACCATTCCGTTTCACAGGCAAAAGGGTAAGTAAGTGGGAAGAACATGAAAGCCGTATTCTTGGGTGGAAGAGAGGGCTCAGTTTTAAGAATACTTAATACTCTGTTACAAAGGATCCTTGTTTGGTTCCCAGCACCCACACTGTGCCGTGGCCTGTAACTCCTGCTCCAGGGGATAGAATGACTTCTTGTGGCTTCCACAGGCCCCCACATATATCAGTTGACATACACAGAAGTAAAACAGTAATCTAACCTCATCCTATCTCCGGCCACTGTGGATAGCTTACAGCTGTTACCTCTACACATTCTGGACCCGGTTTATCTTGTACCCCAGGGTAGAGGATTAACAATCCTGTACCTCTGGTAAACAGCCATCTAGAAAAGGCTCTTTCTGCCTCAACTACTCTTGCCCACCCTTGTCAGGGTGGAAGTATAGCGCCACTGACCTCCTGTCTGCTTCCTTCTCCACCTCAGATATTCTTCTTAAGCAGTAGGGTACACCCTGGAGAGACTCCATCTAGCTT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................................................................................................................................................................................................................TAACAATCCTGTACCTCTGGTAAACAGCCATCTAGAAAAGGCTCTTTCTGCC................................................................................................................................ | 52 | 1 | 51.00 | 51.00 | 51.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....TCCTGATCTCGGCACTCCCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 21 | 1 | 6.00 | 6.00 | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................CTGTAACTCCTGCTCCAGGGGATAGAATGACTTCTTGTGGCTTCCACAGGCC.............................................................................................................................................................................................................................................................................................................................. | 52 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTAAGCAGTAGGGTACACCCTGGA................. | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTAAGCAGTAGGGTACACCCTGG.................. | 25 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAGCAGTAGGGTACACCCTGGAGA............... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGGTACACCCTGGAGAGACTCCATC...... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAGCAGTAGGGTACACCCTGGA................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTCAGATATTCTTCTTAAGCAGTAGGGTACACCCTGGAGAGACTCCATC...... | 52 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTAGGGTACACCCTGGAGA............... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCTTAAGCAGTAGGGTACACCCTGGA................. | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................GTGCCGTGGCCTGTAACTCCTG...................................................................................................................................................................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTAAGCAGTAGGGTACACCCTGGAGA............... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| TATTTCCTGATCTCGGCACTCCCCGACCATTCCGTTTCACAGGCAAAAGGGTAAGTAAGTGGGAAGAACATGAAAGCCGTATTCTTGGGTGGAAGAGAGGGCTCAGTTTTAAGAATACTTAATACTCTGTTACAAAGGATCCTTGTTTGGTTCCCAGCACCCACACTGTGCCGTGGCCTGTAACTCCTGCTCCAGGGGATAGAATGACTTCTTGTGGCTTCCACAGGCCCCCACATATATCAGTTGACATACACAGAAGTAAAACAGTAATCTAACCTCATCCTATCTCCGGCCACTGTGGATAGCTTACAGCTGTTACCTCTACACATTCTGGACCCGGTTTATCTTGTACCCCAGGGTAGAGGATTAACAATCCTGTACCTCTGGTAAACAGCCATCTAGAAAAGGCTCTTTCTGCCTCAACTACTCTTGCCCACCCTTGTCAGGGTGGAAGTATAGCGCCACTGACCTCCTGTCTGCTTCCTTCTCCACCTCAGATATTCTTCTTAAGCAGTAGGGTACACCCTGGAGAGACTCCATCTAGCTT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................TTTGGTTCCCAGCACCCgaa................................................................................................................................................................................................................................................................................................................................................................................................. | 20 | gaa | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................TCCCCGACCATTCCGTTTCACAGGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................CATACACAGAAGTAAAACAGTAATCTA................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................GACTTCTTGTGGCTTCCACAGGCCCCC........................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |