| Gene: Agbl5 | ID: uc008wwc.1_intron_6_0_chr5_31195835_f | SPECIES: mm9 |
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(2) OTHER.mut |
(7) PIWI.ip |
(1) PIWI.mut |
(1) TDRD1.ip |
(20) TESTES |
| AAAGGGGCTGCTTCATGTATGGCAACAGCTTTAGTGACGAGAGCACCCAGGTAGGACTCTGAATCCTGTGGCAGTCAGTCCTGCAGGTTAGGAGATGAGGGGTAGTTACAAACCAGGGCAGGGGAGCCTTCTAGAGGAGCAGGAAGACCTGTGCACACCACCTCAGCACAAGCTTCAAAGGATGGAGAGAAGGCACTAGGGCCAGAGAGCTTAGCCATTGCATCATGGTGTCTGAGTGAAGAACAAGCCCAGCACCCCCGTCTTCCATAGAGCTGAGAACCAGAGAAGGAAAATTTGGAGGGGAATCTGAGCTTAAAAGAAACAGTGCTAAACAGTGACGCGTGAAGAAAACGTGGTTACTCCTGATGGTTGTGATGTTGTATGCGGGTGACATATGCGGCAGAGTAACACGACTGTGCCTTATTTTTCTTGTCCTTGTCCCTTCTTTCTCTGTCATTTTCTGAGTTCCCCTTTTTTCTCCACACACAGGTGGAAAACATGCTATATCCAAAGCTCATCTCCTTGAATTCAGCCCACTT ...................................................................................................................................................................................................................................................................(((.(((...(((((.(((.((...(((......)))....))...))).)))))......((((..((((...((((((((((.......))))).))))).....)))).....))))......))).)))................................................................................................................................................... .................................................................................................................................................................................................................................................................258....................................................................................................................................393................................................................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT1() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................................................................................................................................................................................................................................................................TGATGGTTGTGATGTTGTATGCGGGT...................................................................................................................................................... | 26 | 1 | 4.00 | 4.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................TGACATATGCGGCAGAGTAACACGACT............................................................................................................................ | 27 | 1 | 3.00 | 3.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................GAGAAGGAAAATTTGGAGGGGAATCTGAGC................................................................................................................................................................................................................................... | 30 | 1 | 3.00 | 3.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................TTCCATAGAGCTGAGAACCAGAGAAGG.......................................................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................GGACTCTGAATCCggc...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 16 | ggc | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - |
| .......................................................................................................................................................................................................................................................................TCCATAGAGCTGAGAACCAGAGAAGGA......................................................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................CATAGAGCTGAGAACCAGAGAAGG.......................................................................................................................................................................................................................................................... | 24 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................GAAGAAAACGTGGTTACTCCTGATGGTT........................................................................................................................................................................ | 28 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................TGGCAACAGCTTTAGTGACGAGAGCACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................TGGTTGTGATGTTGTATGCGGGTGAC................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................TTCCATAGAGCTGAGAACCAGAGAAGGA......................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGTGGAAAACATGCTATATCC.............................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................AACCAGGGCAGGGGAGCC........................................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................ACGAGAGCACCCAGGTggaa................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 20 | ggaa | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................CTGATGGTTGTGATGTTGTATGCGGG....................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATCTCCTTGAATTCAGC...... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................TTCCATAGAGCTGAGAACCAGAGAAG........................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TCAAAGGATGGAGAGAAGGCACTAGG................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................TTTAGTGACGAGAGCACCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...................TGGCAACAGCTTTAGTGACGAGAGCAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................TAGTGACGAGAGCACCCAGGTAGGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................TCCATAGAGCTGAGAACCAGAGAAGG.......................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............TGTATGGCAACAGCTTTAGTGACGAGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCAAAGCTCATCTCCTTGAATTC......... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .............................................................................................................................................................................TTCAAAGGATGGAGAGAAGGCAata..................................................................................................................................................................................................................................................................................................................................................... | 25 | ata | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................TGATGGTTGTGATGTTGTATGCGGG....................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................TCCATAGAGCTGAGAACCAGAGAAGGAAA....................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............TGTATGGCAACAGCTTTAGTGACGAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................TAGAGCTGAGAACCAGAGAAGGAAAATT.................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................AACGTGGTTACTCCTGATGGTTGTGAT................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................TCCATAGAGCTGAGAACCAGAGAAGGAAAAT..................................................................................................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AAAGGGGCTGCTTCATGTATGGCAACAGCTTTAGTGACGAGAGCACCCAGGTAGGACTCTGAATCCTGTGGCAGTCAGTCCTGCAGGTTAGGAGATGAGGGGTAGTTACAAACCAGGGCAGGGGAGCCTTCTAGAGGAGCAGGAAGACCTGTGCACACCACCTCAGCACAAGCTTCAAAGGATGGAGAGAAGGCACTAGGGCCAGAGAGCTTAGCCATTGCATCATGGTGTCTGAGTGAAGAACAAGCCCAGCACCCCCGTCTTCCATAGAGCTGAGAACCAGAGAAGGAAAATTTGGAGGGGAATCTGAGCTTAAAAGAAACAGTGCTAAACAGTGACGCGTGAAGAAAACGTGGTTACTCCTGATGGTTGTGATGTTGTATGCGGGTGACATATGCGGCAGAGTAACACGACTGTGCCTTATTTTTCTTGTCCTTGTCCCTTCTTTCTCTGTCATTTTCTGAGTTCCCCTTTTTTCTCCACACACAGGTGGAAAACATGCTATATCCAAAGCTCATCTCCTTGAATTCAGCCCACTT ...................................................................................................................................................................................................................................................................(((.(((...(((((.(((.((...(((......)))....))...))).)))))......((((..((((...((((((((((.......))))).))))).....)))).....))))......))).)))................................................................................................................................................... .................................................................................................................................................................................................................................................................258....................................................................................................................................393................................................................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT1() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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| .........................................................TCTGAATCCTGTGGCAGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGTCCTTGTCCCTg................................................................................................ | 17 | g | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................AAGAACAAGCCCAGCAtgt............................................................................................................................................................................................................................................................................................. | 19 | tgt | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................CCATTGCATCATGGTggct...................................................................................................................................................................................................................................................................................................................... | 19 | ggct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |