(5)
OTHER.mut
(6)
PIWI.ip
(2)
PIWI.mut
(24)
TESTES

Sense strand
CAATCTACTAACATTCACAATAAATTTACGATGGAATAGGGGACTGTTGTGGACCGAGTATGAGAGACAAAACAGGTTGGAAATAGACAGGGGTATCTAGGCGGGACAGCCTCCATTCTGCATGGGACAAGGTCTCAGGCCCGGCCCCCCTGCTTGAGAGGTGAGGTAAGAAGTAAGGCAGTCGTGGTCTTCCTCTGCAGGTGAAGGAAGAGTGCCGCCTGCTTCACGCCCCTCCAGTGCCTCCTAGGGG
.................................................................(((....(((((.((.........(((((....((((......)))).......((.((((((...)))))).))...))))))).))))).........((..........)).)))...................................................................
.......................................................56.................................................................................................................................187.............................................................
Size Perfect hit Total Norm Perfect Norm SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesWT3()
Testes Data. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT4()
Testes Data. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
............................................................TGAGAGACAAAACAGGTTGGAAATAGA................................................................................................................................................................... 27 1 6.00 6.00 4.00 - - - 1.00 - - - - - - - - - - - - - - - 1.00 - - -
...............................................TGTGGACCGAGTATGAGAGACAAAAC................................................................................................................................................................................. 26 1 6.00 6.00 - - 1.00 - - - - - - - 2.00 - - - 2.00 - - - 1.00 - - - - -
............................................................TGAGAGACAAAACAGGTTGGAAATAGAC.................................................................................................................................................................. 28 1 5.00 5.00 2.00 - - - 1.00 - - - - 1.00 1.00 - - - - - - - - - - - - -
............................................TGTTGTGGACCGAGTATGAGAGACAAA................................................................................................................................................................................... 27 1 4.00 4.00 - - 4.00 - - - - - - - - - - - - - - - - - - - - -
............................................................TGAGAGACAAAACAGGTTGGAAATAG.................................................................................................................................................................... 26 1 4.00 4.00 1.00 - - - - - - - 1.00 - - - - - - 1.00 - 1.00 - - - - - -
.............................................................................................................................................................................................TTCCTCTGCAGGTGAAGGAAGAGTGC................................... 26 1 4.00 4.00 - 3.00 - - - - - 1.00 - - - - - - - - - - - - - - - -
..........................TACGATGGAATAGGGGACTGTTGTGGAC.................................................................................................................................................................................................... 28 1 3.00 3.00 - 2.00 - - - - - - - - - - 1.00 - - - - - - - - - - -
...............................................TGTGGACCGAGTATGAGAGACAAAACAG............................................................................................................................................................................... 28 1 3.00 3.00 - - 2.00 - - - - - - - 1.00 - - - - - - - - - - - - -
..............................................TTGTGGACCGAGTATGAGAGACAAAA.................................................................................................................................................................................. 26 1 2.00 2.00 - - 2.00 - - - - - - - - - - - - - - - - - - - - -
....................TAAATTTACGATGGAATAGGGGACT............................................................................................................................................................................................................. 25 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - -
..........................TACGATGGAATAGGGGACTGTTGTGGACC................................................................................................................................................................................................... 29 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - -
...............................................TGTGGACCGAGTATGAGAGACAAAACA................................................................................................................................................................................ 27 1 2.00 2.00 - - 1.00 - - - - - - - - 1.00 - - - - - - - - - - - -
.............................................................................TGGAAATAGACAGGGGTATCTAGGC.................................................................................................................................................... 25 1 2.00 2.00 - - - - - - 2.00 - - - - - - - - - - - - - - - - -
............................................................TGAGAGACAAAACAGGTTGGAAATAGACA................................................................................................................................................................. 29 1 2.00 2.00 - - - - - 2.00 - - - - - - - - - - - - - - - - - -
....................................................................AAAACAGGTTGGAAATAGACAGGGGT............................................................................................................................................................ 26 1 2.00 2.00 - - - - - - - - - - - - - 2.00 - - - - - - - - - -
............................................................................TTGGAAATAGACAGGGGTATCTAGGC.................................................................................................................................................... 26 1 2.00 2.00 - - - 2.00 - - - - - - - - - - - - - - - - - - - -
....................................TAGGGGACTGTTGTGGACCGAGTATGAGA......................................................................................................................................................................................... 29 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - -
..........................TACGATGGAATAGGGGACTGTTGTG....................................................................................................................................................................................................... 25 1 2.00 2.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - -
..........................TACGATGGAATAGGGGACTGTTGT........................................................................................................................................................................................................ 24 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................AAGTAAGGCAGTCGTGGTCTTCCTCTGC.................................................... 28 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...............................TGGAATAGGGGACTGTTGTGGACt................................................................................................................................................................................................... 24 t 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.................................................................GACAAAACAGGTTGGAAATAGACAGG............................................................................................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
......................AATTTACGATGGAATAGGGGACTGT........................................................................................................................................................................................................... 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..........................TACGATGGAATAGGGGACTGTTGTGGA..................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................TCTGCAGGTGAAGGAAGAGTGCCGC................................ 25 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
...............................................................................................TCTAGGCGGGACAGCCTCCATTCTG.................................................................................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - -
...................................................................................................................................................................................................TGCAGGTGAAGGAAGAGTGCCGCCTG............................. 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
............................CGATGGAATAGGGGACTGTTGTGGAC.................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.........................TTACGATGGAATAGGGGACTGTTGTG....................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
............................................TGTTGTGGACCGAGTATGAGAGACAA.................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - -
......................................................................................................................................TCAGGCCCGGCCCCCCTGCTTGAGAGG......................................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...............................................................GAGACAAAACAGGTTGGAAATAGACAG................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - -
...............................................TGTGGACCGAGTATGAGAGACAAAACAGG.............................................................................................................................................................................. 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - -
..........................................................TATGAGAGACAAAACAGGTTGGAAATA..................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...................................................................CAAAACAGGTTGGAAATAGACAGGG.............................................................................................................................................................. 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................TGGTCTTCCTCTGCAGGTGAAGGAAG........................................ 26 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
.................................................................................................................................................................................................TCTGCAGGTGAAGGAAGAGTGCCGCC............................... 26 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - -
..........................TACGATGGAATAGGGGACTGTTGTGG...................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - -
......................................................................................................................................................TGCTTGAGAGGTGAGGTAAGAAGTA........................................................................... 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...................................................................................TAGACAGGGGTATCTAGGCGGGACAGCCTC......................................................................................................................................... 30 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - -
..........................................................................................................................................................TGAGAGGTGAGGTAAGAAGTAAGGCAGTC................................................................... 29 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - -
.....................AAATTTACGATGGAATAGGGGACTG............................................................................................................................................................................................................ 25 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
....................TAAATTTACGATGGAATAGGGGACTGT........................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00
..........................................................TATGAGAGACAAAACAGGTTGGAAATAGA................................................................................................................................................................... 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................TAGGCGGGACAGCCTCCATTCTGCATGGGt........................................................................................................................... 30 t 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................CGTGGTCTTCCTCTGCAGGTGAAGG........................................... 25 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
............................................................TGAGAGACAAAACAGGTTGGAAATAGACAGGa.............................................................................................................................................................. 32 a 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...................................................................................TAGACAGGGGTATCTAGGCGGGACAGCCTt......................................................................................................................................... 30 t 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
................................................................AGACAAAACAGGTTGGAAATAGACAGG............................................................................................................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
............................................TGTTGTGGACCGAGTATGAGAGACA..................................................................................................................................................................................... 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................TGCAGGTGAAGGAAGAGTGCCGCCT.............................. 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
....................................TAGGGGACTGTTGTGGACCGAGTATG............................................................................................................................................................................................ 26 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
....................TAAATTTACGATGGAATAGGGGACTGTT.......................................................................................................................................................................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..........................TACGATGGAATAGGGGACTGTTGTGGAac................................................................................................................................................................................................... 29 ac 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................AGAGTGCCGCCTGCTTCACGCCCCTC................ 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - -
....................TAAATTTACGATGGAATAGGGGA............................................................................................................................................................................................................... 23 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
............ATTCACAATAAATTTACGATGGAATAGGGa................................................................................................................................................................................................................ 30 a 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -

Antisense strand
CAATCTACTAACATTCACAATAAATTTACGATGGAATAGGGGACTGTTGTGGACCGAGTATGAGAGACAAAACAGGTTGGAAATAGACAGGGGTATCTAGGCGGGACAGCCTCCATTCTGCATGGGACAAGGTCTCAGGCCCGGCCCCCCTGCTTGAGAGGTGAGGTAAGAAGTAAGGCAGTCGTGGTCTTCCTCTGCAGGTGAAGGAAGAGTGCCGCCTGCTTCACGCCCCTCCAGTGCCTCCTAGGGG
.................................................................(((....(((((.((.........(((((....((((......)))).......((.((((((...)))))).))...))))))).))))).........((..........)).)))...................................................................
.......................................................56.................................................................................................................................187.............................................................
Size Perfect hit Total Norm Perfect Norm SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesWT3()
Testes Data. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT4()
Testes Data. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
............................................................................................................................................................................................................................GCTTCACGCCCCTCCAGTGCCTCCTA.... 26 1 8.00 8.00 - - - 7.00 - - - - - - - 1.00 - - - - - - - - - - - -
..........................................................................................................................................................................................................................CTGCTTCACGCCCCTCCAGTGCCTCCTA.... 28 1 6.00 6.00 - - - - - 6.00 - - - - - - - - - - - - - - - - - -
..................................................................................................AGGCGGGACAGCCTCCATTCTGCA................................................................................................................................ 24 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................ATTCTGCATGGGACAAGGTCTCA................................................................................................................. 23 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
............................................................................AAATAGACAGGGGTAaact........................................................................................................................................................... 19 aact 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 -
................................................................AGACAAAACAGGTTGGAAATAGACA................................................................................................................................................................. 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................CGGCCCCCCTGCTTGAGAGGTGAGGTAA................................................................................. 28 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.................................................................................................TAGGCGGGACAGCCTCCATTCTGCA................................................................................................................................ 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..ATCTACTAACATTCACAATAAATTTA.............................................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................TTCACGCCCCTCCAGTGCCTCCTAa.... 25 a 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................GAAGGAAGAGTGCCGCCTGCTTCA........................ 24 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.............................................................GAGAGACAAAACAGGTTGGAAATAGACA................................................................................................................................................................. 28 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - -
..............................................................................................................................................................................................................................TTCACGCCCCTCCAGTGCCTCCTA.... 24 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
..........ACATTCACAATAAATTTA.............................................................................................................................................................................................................................. 18 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -