| Gene: Kcnh2 | ID: uc008wrb.1_intron_7_0_chr5_23830974_r | SPECIES: mm9 |
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(8) OTHER.mut |
(1) PIWI.ip |
(12) TESTES |
| CAACACCAACTCAGAGAAGATCTTCTCCATCTGTGTCATGCTCATTGGCTGTGAGTGCGTCCTGGAGGCGGGTGAGGGGTGGAGCCATGGCTGGATAGAAATGGTAGTGAAAGTCCTAGGATGGAGCAAAGTGGCAGTCGGACCTCCCCGCCCCGCCCCCTCGTCCCTTCCTAGAGTCCTGGGCTCACAGTTGAGTTTGGAGGCTGGGACACCAGGGCAGGAAATGGTGAAGGTTGGCGTGTGTTTGAGCATGTGTATGTCCACTCTCAGACTGAGTCGTGACCGGACCGCGAGTGTCGTTGACCTGGTGCGGGGCCTGAGCAGAGGGTCCCCGTGGGCGGGCGGGGTCCCTGCGGATGCTGACGGCCCCACTCACCCACGCCCCCAGCCCTCATGTATGCCAGCATCTTCGGCAACGTGTCCGCCATCATCCAGCGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................................................................................................................................................................................................................GGTCCCTGCGGATGCTGA........................................................................... | 18 | 1 | 6.00 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................TCCCTGCGGATGCTGACGcaa...................................................................... | 21 | caa | 4.00 | 0.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................CCCTGCGGATGCTGACGca....................................................................... | 19 | ca | 4.00 | 3.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................CCCTGCGGATGCTGACG......................................................................... | 17 | 1 | 3.00 | 3.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................GTGTCGTTGACCTGGTGCGGG............................................................................................................................ | 21 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................GACTGAGTCGTGACCGG........................................................................................................................................................ | 17 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................CCTGCGGATGCTGACGca....................................................................... | 18 | ca | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................GGTCCCTGCGGATGCTGACGca....................................................................... | 22 | ca | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................CCCTGCGGATGCTGACGcaa...................................................................... | 20 | caa | 2.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................GTCCCTGCGGATGCTGACGcaa...................................................................... | 22 | caa | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................GTCCCTGCGGATGCTGAC.......................................................................... | 18 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................TGAGTCGTGACCGGACCGCGAGTGTCGT.......................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................TGTGTATGTCCACTCTCAGACTGAGTCG............................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .............................................................CTGGAGGCGGGTGAcatc....................................................................................................................................................................................................................................................................................................................................................................... | 18 | catc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................GGTCCCTGCGGATGCTcacg......................................................................... | 20 | cacg | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................CCCGTGGGCGGGCGGGGTCCttaa.................................................................................... | 24 | ttaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................GTCCCTGCGGATGCTGACG......................................................................... | 19 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................GGTCCCTGCGGATGCTaa........................................................................... | 18 | aa | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................TCCCTGCGGATGCTGACGca....................................................................... | 20 | ca | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................GTCCCTGCGGATGCTGACGca....................................................................... | 21 | ca | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................CCCACTCACCCACGCCCCCActat............................................... | 24 | ctat | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................CGGGGCCTGAGCAGAGGG.............................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................TCGTGACCGGACCGCGAGTGTCGTT......................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................ACCGGACCGCGAGTGTCGTTGACCTGG.................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............................................................................................................................................................................................TTGAGTTTGGAGGCTGG....................................................................................................................................................................................................................................... | 17 | 3 | 0.67 | 0.67 | - | - | - | - | - | 0.67 | - | - | - | - | - | - |
| CAACACCAACTCAGAGAAGATCTTCTCCATCTGTGTCATGCTCATTGGCTGTGAGTGCGTCCTGGAGGCGGGTGAGGGGTGGAGCCATGGCTGGATAGAAATGGTAGTGAAAGTCCTAGGATGGAGCAAAGTGGCAGTCGGACCTCCCCGCCCCGCCCCCTCGTCCCTTCCTAGAGTCCTGGGCTCACAGTTGAGTTTGGAGGCTGGGACACCAGGGCAGGAAATGGTGAAGGTTGGCGTGTGTTTGAGCATGTGTATGTCCACTCTCAGACTGAGTCGTGACCGGACCGCGAGTGTCGTTGACCTGGTGCGGGGCCTGAGCAGAGGGTCCCCGTGGGCGGGCGGGGTCCCTGCGGATGCTGACGGCCCCACTCACCCACGCCCCCAGCCCTCATGTATGCCAGCATCTTCGGCAACGTGTCCGCCATCATCCAGCGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCCGCCATCATCtgag...... | 19 | tgag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .....................................................................................................................................................................CCTTCCTAGAGTCCT.................................................................................................................................................................................................................................................................. | 15 | 12 | 0.08 | 0.08 | - | 0.08 | - | - | - | - | - | - | - | - | - | - |