| Gene: AK017143 | ID: uc008wpw.1_intron_1_0_chr5_22890334_r | SPECIES: mm9 |
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(4) OTHER.mut |
(5) PIWI.ip |
(4) PIWI.mut |
(30) TESTES |
| ACTGAACTCTGATACAGCAGTACTCGGATACACTGAACTCTGATACAGCAGTACTCGGATACACTGAACTCTGATACAGCAGTACTCTGATACACCGAACTCTGATACAGCAGTACTCTGATACACTGAACTCTGATACAGCAGTACTCTGATACACCGAACTCTGATACAGCAGTACTCGGATACACTGAACTCTGATACAGCAGTACTCTGATACACCGAACTCTGATACAGCAGTACTCGGATACACTGAACTCTGATACAGCAGTACTCTGATACACTGAACTCTGATACAGCAGTACTCTGATACACTGAACTCTGATACAGCAGTACTCGGATACACTGAACTCTGATACAGCAGTACTCGGATACACTGAACTCTGATACAGCAGTACTCGGATACACTGAACTCTGATACAGCAGTACTCTGATACACTGAACTCTGATACAGCAGTACTCTGATACACTGAACT ......................................................................................................................................................................................................................................................................................................................................((.(((.(((((..((.((...((((((((.((.(((.(((((..........)))))))).)).))).)))))..)).))...)))))))).)).................................................... ...................................................................................................................................................................................................................................................................................................................................324................................................................................................423................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | mjTestesWT4() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT1() Testes Data. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................................TGATACAGCAGTACTCTGATACACCGAAC......................................................................................................................................................................................................................................................... | 29 | 3 | 7.00 | 7.00 | - | - | - | 6.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGAACTCTGATACAGCAGTACTCTGATA............................................................................................................................................................................................................................................................................................................................... | 28 | 9 | 7.00 | 7.00 | 2.33 | 1.56 | - | - | - | 1.56 | - | - | 0.78 | 0.78 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGATACACCGAACTCTGATACAGCAG............................................................................................................................................................................................................................................ | 26 | 3 | 7.00 | 7.00 | 1.00 | - | - | 4.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................TGATACACTGAACTCTGATACAGCAGT........................................................................................................................................................................................................................................................................................................................................ | 27 | 8 | 6.50 | 6.50 | 0.50 | 0.50 | - | - | - | - | 1.50 | 1.00 | - | - | - | 1.00 | - | 0.50 | - | - | - | - | - | - | 0.50 | - | 0.50 | 0.50 | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................ACTGAACTCTGATACAGCAGTACTCGGtt....................................................................................................... | 29 | tt | 5.00 | 0.00 | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGATACACCGAACTCTGATACAGCAGT....................................................................................................................................................................................................................................................................................................................................................................... | 27 | 3 | 4.00 | 4.00 | 1.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................TACACTGAACTCTGATACAGCAGTACTCGGAa............................................................................................................................................................................................................................................................................................................................................................................................................................. | 32 | a | 4.00 | 0.00 | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TGAACTCTGATACAGCAGTACTCTGAT.............................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 9 | 3.11 | 3.11 | 0.78 | 1.56 | - | - | - | - | - | - | 0.78 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................TGATACACCGAACTCTGATACAGCAGTA........................................................................................................................................................................................................................................................................................................ | 28 | 3 | 3.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................TGAACTCTGATACAGCAGTACTCGGAT............................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 15 | 3.00 | 3.00 | 1.33 | 0.67 | - | - | - | - | - | 0.67 | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................ACACTGAACTCTGATACAGCAGTACTCG........................................................................... | 28 | 15 | 2.67 | 2.67 | 0.80 | 1.07 | - | - | 0.53 | - | - | - | - | - | - | - | - | - | - | - | 0.27 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................TGATACACTGAACTCTGATACAGCAG.............................................................................................................................................................................. | 26 | 8 | 2.50 | 2.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................TGATACACTGAACTCTGATACAGCAGTACTC......................................................................................................................................................................... | 31 | 8 | 2.50 | 2.50 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGAACTCTGATACAGCAGTACTCTGATAC.............................................................................................................................................................................................................................................................................................................................. | 29 | 9 | 2.33 | 2.33 | - | - | - | - | - | 0.78 | - | - | - | 0.78 | - | - | - | - | - | - | - | 0.78 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................TGATACACTGAACTCTGATACAGCAGTAC............................................................................................................................................ | 29 | 8 | 2.00 | 2.00 | 0.50 | - | - | - | 1.00 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................TACACCGAACTCTGATACAGCAGTACTC................................................................................................................................................................................................................................................................................................................................................................... | 28 | 3 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................TGATACACTGAACTCTGATACAGCAGTA....................................................................................................................................................................................................................................................................................................................................... | 28 | 8 | 2.00 | 2.00 | 1.00 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................ACTCTGATACAGCAGTACTCTGATACACC........................................................................................................................................................................................................................................................................................................................... | 29 | 3 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................TGAACTCTGATACAGCAGTACTCGGATA....................................................................... | 28 | 15 | 1.33 | 1.33 | 0.33 | 0.33 | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 |
| ..................................................................................................................................................................................................................................TGATACAGCAGTACTCGGATACACTGA............................................................................................................................................................................................................................ | 27 | 17 | 1.24 | 1.24 | 0.82 | - | - | - | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............TACAGCAGTACTCGGATACACTGAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 17 | 1.24 | 1.24 | - | 0.41 | - | - | - | 0.41 | - | - | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................TACACTGAACTCTGATACAGCAGTACTCG......................................................................................................................................... | 29 | 15 | 1.07 | 1.07 | 0.53 | - | - | - | 0.53 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................TGATACAGCAGTACTCTGATACACCGAA...................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 3 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................GATACACCGAACTCTGATACAGCAGTA........................................................................................................................................................................................................................................................................................................ | 27 | 3 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGATACACCGAACTCTGATACAGCAGTAC..................................................................................................................................................................................................................................................................................................................................................................... | 29 | 3 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................ACACCGAACTCTGATACAGCAGTACTCTG................................................................................................................................................................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................TGATACAGCAGTACTCTGATACACCGA....................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 3 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................CCGAACTCTGATACAGCAGTACTCTGATA.............................................................................................................................................................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................ACTCTGATACACCGAACTCTGATACAGC............................................................................................................................................................................................................................................................................................................ | 28 | 3 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................CGAACTCTGATACAGCAGTACTCGGATA.................................................................................................................................................................................................................................. | 28 | 2 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................TGATACACCGAACTCTGATACAGCAGTACTC..................................................................................................................................................................................................................................................................................................... | 31 | 3 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGATACACCGAACTCTGATACAGCAGTtt..................................................................................................................................................................................................................................................................................................................................................................... | 29 | tt | 1.00 | 4.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................CCGAACTCTGATACAGCAGTACTCTGA................................................................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................CGGATACACTGAACTCTGATACAGCAG................................................................................................................ | 27 | 16 | 0.88 | 0.88 | - | - | - | - | - | - | - | 0.88 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................TCGGATACACTGAACTCTGATACAGCAG....................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 16 | 0.88 | 0.88 | - | - | - | - | - | - | - | - | 0.44 | - | - | - | 0.44 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................TACAGCAGTACTCGGATACACTGAACTC.................................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 17 | 0.82 | 0.82 | - | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.41 | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................CACTGAACTCTGATACAGCAGTACTCG........................................................................... | 27 | 15 | 0.80 | 0.80 | 0.27 | 0.27 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.27 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................TACACTGAACTCTGATACAGCAGTACTCT....................................................................................................................................................................................................... | 29 | 9 | 0.78 | 0.78 | - | - | - | - | 0.78 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................CTGAACTCTGATACAGCAGTACTCTGATA................................................................................................................................................................................................... | 29 | 9 | 0.78 | 0.78 | 0.78 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................TACACTGAACTCTGATACAGCAGTACTCTGA...................................................................................................................................................................... | 31 | 9 | 0.78 | 0.78 | - | - | - | - | - | - | - | - | - | - | 0.78 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................ACTGAACTCTGATACAGCAGTACTCTGATtc............................................................................................................................................................................................................................................................................................................................................................................................ | 31 | tc | 0.78 | 0.78 | - | - | 0.78 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACTCTGATACAGCAGTACTCTGAT......................................... | 28 | 9 | 0.78 | 0.78 | - | - | - | - | 0.78 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................CTGAACTCTGATACAGCAGTACTCTG...................................................................................................................................................................................................... | 26 | 9 | 0.78 | 0.78 | - | 0.78 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................CTGAACTCTGATACAGCAGTACTCTGA................................................................................................................................................................................................................................................................................................................................. | 27 | 9 | 0.78 | 0.78 | - | 0.78 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................ACTGAACTCTGATACAGCAGTACTCTGAT..................................................................................................................................................................... | 29 | 9 | 0.78 | 0.78 | - | - | - | - | 0.78 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGAACTCTGATACAGCAGTACTCTGA................................................................................................................................................................................................................................................................................................................................. | 26 | 9 | 0.78 | 0.78 | 0.78 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................TGATACACTGAACTCTGATACAGCAGTACTCT........................................................................................................................................................................ | 32 | 4 | 0.75 | 0.75 | - | - | 0.75 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................CAGCAGTACTCTGATACAC............................................................................................................................................................................................................................................................................................................................ | 19 | 11 | 0.73 | 0.73 | - | - | - | - | - | - | - | 0.73 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................TGATACAGCAGTACTCTGATACACTGA............................................................................................................................................................................................. | 27 | 7 | 0.71 | 0.71 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.71 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .CTGAACTCTGATACAGCAGTACTCGGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 28 | 15 | 0.67 | 0.67 | 0.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................CTGAACTCTGATACAGCAGTACTCGG......................................................................................................... | 26 | 15 | 0.67 | 0.67 | 0.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................TGAACTCTGATACAGCAGTACTCGGA........................................................................................................ | 26 | 15 | 0.67 | 0.67 | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................ATACAGCAGTACTCTGATACACTGAACTC.......................................................................................................................................................... | 29 | 7 | 0.57 | 0.57 | - | - | - | - | - | - | - | - | - | - | 0.57 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................ACACTGAACTCTGATACAGCAGTACTCGG......................................................................................................... | 29 | 15 | 0.53 | 0.53 | - | - | - | - | - | - | - | 0.27 | - | - | - | - | - | - | - | - | 0.27 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................CTCTGATACACTGAACTCTGATACAGCAGT............................................................................................................................................................................. | 30 | 8 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................TGATACACTGAACTCTGATACAGCAGTACT........................................................................................................................................... | 30 | 8 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................TCTGATACACTGAACTCTGATACAGCAGTAC............................................................................................................................................ | 31 | 8 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................GGATACACTGAACTCTGATACAGCAGTACTC............................................. | 31 | 16 | 0.44 | 0.44 | - | - | - | - | - | - | - | - | - | - | 0.44 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................CGGATACACTGAACTCTGATACAGCAGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 16 | 0.44 | 0.44 | - | - | - | - | 0.44 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........ATACAGCAGTACTCGGATACACTGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 17 | 0.41 | 0.41 | - | - | - | - | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................TCTGATACAGCAGTACTCGGATAC................................................................................................................................................................................................................................. | 24 | 17 | 0.41 | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.41 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................TGATACAGCAGTACTCGGATACACT.................................................................................................. | 25 | 17 | 0.41 | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.41 | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................TGATACAGCAGTACTCGGATACACTGAACTC............................................................................................ | 31 | 17 | 0.41 | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.41 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................TCTGATACAGCAGTACTCGGATACACT.................................................................................................. | 27 | 17 | 0.41 | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.41 | - | - | - | - | - | - | - | - | - |
| ...........................................TACAGCAGTACTCGGATACACTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 17 | 0.41 | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.41 | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................TGATACAGCAGTACTCGGATACACTGAAC.............................................................................................. | 29 | 17 | 0.41 | 0.41 | - | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................ACTCGGATACACTGAACTCTGATACAGC................................................................................... | 28 | 17 | 0.41 | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........TGATACAGCAGTACTCGGATACACTGAt.................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | t | 0.41 | 1.24 | - | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................ATACAGCAGTACTCGGATACACTGAAC.................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 17 | 0.41 | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.41 | - |
| ................................................................................................................................................................................................................................................TCGGATACACTGAACT......................................................................................................................................................................................................................... | 16 | 17 | 0.41 | 0.41 | - | - | - | - | - | - | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................TCTGATACAGCAGTACTCGGATACACTG................................................................................................. | 28 | 17 | 0.41 | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.41 | - | - | - | - |
| ....................................................................................................................................................................TGATACAGCAGTACTCGGATACACTGAA......................................................................................................................................................................................................................................................................................... | 28 | 17 | 0.41 | 0.41 | - | - | - | - | - | - | - | - | - | - | - | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................TACAGCAGTACTCGGATACACTGAACTCT..................................................................................................................................................................................................................................................................................... | 29 | 17 | 0.41 | 0.41 | - | - | - | - | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................ACTGAACTCTGATACAGCAGTACTCG.......................................................................................................... | 26 | 15 | 0.33 | 0.33 | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................ATACACTGAACTCTGATACAGCAGTACTCG.......................................................................................................... | 30 | 15 | 0.27 | 0.27 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.27 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................GATACACTGAACTCTGATACAGCAGTACTCG.......................................................................................................... | 31 | 15 | 0.27 | 0.27 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.27 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................ACACTGAACTCTGATACAGCAGTACTCGGA......................................................................... | 30 | 15 | 0.27 | 0.27 | - | - | - | - | 0.27 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ACTGAACTCTGATACAGCAGTACTCGGATACACTGAACTCTGATACAGCAGTACTCGGATACACTGAACTCTGATACAGCAGTACTCTGATACACCGAACTCTGATACAGCAGTACTCTGATACACTGAACTCTGATACAGCAGTACTCTGATACACCGAACTCTGATACAGCAGTACTCGGATACACTGAACTCTGATACAGCAGTACTCTGATACACCGAACTCTGATACAGCAGTACTCGGATACACTGAACTCTGATACAGCAGTACTCTGATACACTGAACTCTGATACAGCAGTACTCTGATACACTGAACTCTGATACAGCAGTACTCGGATACACTGAACTCTGATACAGCAGTACTCGGATACACTGAACTCTGATACAGCAGTACTCGGATACACTGAACTCTGATACAGCAGTACTCTGATACACTGAACTCTGATACAGCAGTACTCTGATACACTGAACT ......................................................................................................................................................................................................................................................................................................................................((.(((.(((((..((.((...((((((((.((.(((.(((((..........)))))))).)).))).)))))..)).))...)))))))).)).................................................... ...................................................................................................................................................................................................................................................................................................................................324................................................................................................423................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | mjTestesWT4() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT1() Testes Data. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................................................................................................................................................................................................................................AGCAGTACTCGGATACACTGAACTCTGA.......................................................... | 28 | 17 | 0.41 | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............CAGCAGTACTCGGATACACTGAACTCTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................. | 29 | 17 | 0.41 | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................TACAGCAGTACTCGGATACACTGAAC............................................................... | 26 | 17 | 0.41 | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |