(1)
OTHER.ip
(7)
OTHER.mut
(6)
PIWI.ip
(3)
PIWI.mut
(33)
TESTES

Sense strand
GGCGCATAGCATTTGACATTTCAGTGCTACCGGAGCAAGCAATACTCCAGGTTTGTAGGAGTTTGTTGAATAGTTTTCTTACAATTTGAGTATAGTTTGGAGTTAGGGTAAGTATGTTTGCTTATAATTCCTTATTTTAAAAATTATCGGCTGGGCCGAAGTCTGGCTGATGAAGGGCGGAAGTAAGAGTACCAACTCCGCAATCATGGCTCAAGAGGAGGATGATGTTAGAGATTACAATTTGACGGAG
.....................................................................................(((.((((..((((((((.((((((((((....)))))))....))).))))))))..((((((((..(((....)))..))))))))...((....))....))))))).......................................................
.................................................................................82...............................................................................................................195.....................................................
Size Perfect hit Total Norm Perfect Norm mjTestesWT4()
Testes Data. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesWT3()
Testes Data. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR042485(GSM539877)
mouse testicular tissue [09-002]. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
...................................................................................................................................................................TGGCTGATGAAGGGCGGAAGTAAGg.............................................................. 25 g 27.00 0.00 24.00 - - 2.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................GCTGATGAAGGGCGGAAGTAAGAGTA........................................................... 26 2 6.00 6.00 - - 0.50 - 2.00 - 1.00 0.50 - - - 0.50 - - - - - - - - - - - - - - 0.50 0.50 - - - 0.50 -
.......................................................................................................................................................................TGATGAAGGGCGGAAGTA................................................................. 18 2 2.50 2.50 2.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................TAGAGATTACAATTTGACGGAGgaaa 26 gaaa 2.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.................................................................................................................................................................TCTGGCTGATGAAGGGCGGAAGTAAG............................................................... 26 2 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................GCTGATGAAGGGCGGAAGTAAGAGT............................................................ 25 2 1.50 1.50 - - - - - - 0.50 - - - 0.50 - - - - - - - - - - - - - - - - - - - 0.50 - -
.......................................................................................................................................................................TGATGAAGGGCGGAAGTAAGAGTA........................................................... 24 2 1.50 1.50 - 1.00 - - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................CGAAGTCTGGCTGATGAAGGGCGGA..................................................................... 25 2 1.50 1.50 - - - - - - 0.50 - 0.50 - - 0.50 - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................AGTACCAACTCCGCAATCATGGCTCAAGt.................................. 29 t 1.00 0.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
......................................................................................TGAGTATAGTTTGGAGTTAGGGTAA........................................................................................................................................... 25 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................TCATGGCTCAAGAGGAGGATGATGTT..................... 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................TAGTTTTCTTACAATTTGAGTATAGTT......................................................................................................................................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................TTTCAGTGCTACCGGtcc...................................................................................................................................................................................................................... 18 tcc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
..............................................................................................................................................................................................................................TGATGTTAGAGATTACAATTTGACGGA. 27 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.............................................TCCAGGTTTGTAGGAGTTTGTTGAA.................................................................................................................................................................................... 25 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................GCCGAAGTCTGGCTGATGAAGGGCGG...................................................................... 26 2 1.00 1.00 - - - - - - 0.50 - - 0.50 - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................CGGAAGTAAGAGTACCAACTCCGCAATCt............................................ 29 t 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
............................................................................................................................................................CGAAGTCTGGCTGATGAAGGGCGt...................................................................... 24 t 1.00 0.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
.............................................................................................................................................................................AGGGCGGAAGTAAGggta........................................................... 18 ggta 1.00 0.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..................................................................................................................................................................CTGGCTGATGAAGGGCGGAAGTAAGA.............................................................. 26 2 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................TGATGAAGGGCGGAAGTAAGggt............................................................ 23 ggt 1.00 0.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................GAAGTCTGGCTGATGAAGGGCGGA..................................................................... 24 2 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................GATGTTAGAGATTACAATTTGACGGA. 26 2 1.00 1.00 - - - - - - - - 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................GAAGTCTGGCTGATGAAGGG......................................................................... 20 2 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................AAGTCTGGCTGATGAAGGGCGGAAG................................................................... 25 2 0.50 0.50 - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................GAAGTCTGGCTGATGAAGGGCGGAAGT.................................................................. 27 2 0.50 0.50 - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................AAGGGCGGAAGTAAGAGTACCAACTCC................................................... 27 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................TGGCTGATGAAGGGCGGAAGTAA................................................................ 23 2 0.50 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................AAGTCTGGCTGATGAAGGGCGG...................................................................... 22 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................AGATTACAATTTGACGGAG 19 2 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - 0.50 - - - - - - - - -
...............................................................................................................................................................AGTCTGGCTGATGAAGGGCGGAAGTA................................................................. 26 2 0.50 0.50 - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................ATGAAGGGCGGAAGTAAGAGTACCAACTC.................................................... 29 2 0.50 0.50 - - - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................TGAAGGGCGGAAGTAAGAGTAC.......................................................... 22 2 0.50 0.50 - - - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................CTCCGCAATCATGGCTCAAGAGGAGG............................. 26 2 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - 0.50 - - - - - - -
..........................................................................................................................................................................TGAAGGGCGGAAGTAAGAGTACCAACTC.................................................... 28 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................ATGAAGGGCGGAAGTAAGAGTACCAAC...................................................... 27 2 0.50 0.50 - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................GTAAGAGTACCAACTCCG.................................................. 18 2 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - 0.50 - - - - - - - - - - -
..............................................................................................................................................................AAGTCTGGCTGATGAAGGGCGGAAGT.................................................................. 26 2 0.50 0.50 - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................AGGGCGGAAGTAAGAGTACCAACTCCGCA................................................ 29 2 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - 0.50 - - - - - - - - - -
...............................................................................................................................................................................................................................GATGTTAGAGATTACAATTTGACGG.. 25 2 0.50 0.50 - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................GTACCAACTCCGCAATCATGGCTCAAG................................... 27 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................AAGTCTGGCTGATGAAGGGCGGAAGTAAGAG............................................................. 31 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................TGGCTGATGAAGGGCGGAAGTAAGAGT............................................................ 27 2 0.50 0.50 - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................GCCGAAGTCTGGCTGATGAAGGGCGGAA.................................................................... 28 2 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.50 - - -
..........................................................................................................................................................GCCGAAGTCTGGCTGATGAAGGGCGGAAGT.................................................................. 30 2 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.50 - - - -
.............................................................................................................................................................................................TACCAACTCCGCAATCATGGCTCAAGA.................................. 27 2 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - 0.50 - - - - - - - -
.............................................................................................................................................................GAAGTCTGGCTGATGAAGGGCGGAAG................................................................... 26 2 0.50 0.50 - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................GGCCGAAGTCTGGCTGATGAAGGGCGG...................................................................... 27 2 0.50 0.50 - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................AAGTAAGAGTACCAACTCC................................................... 19 2 0.50 0.50 - - - - - - - - - - - - - - - - 0.50 - - - - - - - - - - - - - - - -
.....................................................................................................................................................................GCTGATGAAGGGCGGAAGTAAGAGTAt.......................................................... 27 t 0.50 6.00 - - - - - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................GAGTACCAACTCCGCAATCATGGCTCA..................................... 27 2 0.50 0.50 - - - - - - - - - - - - - - - - 0.50 - - - - - - - - - - - - - - - -
...............................................................................................................................................................AGTCTGGCTGATGAAG........................................................................... 16 3 0.33 0.33 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.33

Antisense strand
GGCGCATAGCATTTGACATTTCAGTGCTACCGGAGCAAGCAATACTCCAGGTTTGTAGGAGTTTGTTGAATAGTTTTCTTACAATTTGAGTATAGTTTGGAGTTAGGGTAAGTATGTTTGCTTATAATTCCTTATTTTAAAAATTATCGGCTGGGCCGAAGTCTGGCTGATGAAGGGCGGAAGTAAGAGTACCAACTCCGCAATCATGGCTCAAGAGGAGGATGATGTTAGAGATTACAATTTGACGGAG
.....................................................................................(((.((((..((((((((.((((((((((....)))))))....))).))))))))..((((((((..(((....)))..))))))))...((....))....))))))).......................................................
.................................................................................82...............................................................................................................195.....................................................
Size Perfect hit Total Norm Perfect Norm mjTestesWT4()
Testes Data. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesWT3()
Testes Data. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR042485(GSM539877)
mouse testicular tissue [09-002]. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
....................................................................................................................................................GCTGGGCCGAAGTCTGGCa................................................................................... 19 a 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................AGTAAGAGTACCAACTCCGCAATCA............................................ 25 2 0.50 0.50 - - - - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................ACCAACTCCGCAATCATGGCTCAAGA.................................. 26 2 0.50 0.50 - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -