| Gene: Tnfrsf4 | ID: uc008wfu.1_intron_3_0_chr4_155389562_f | SPECIES: mm9 |
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(1) OTHER.mut |
(1) OVARY |
(1) PIWI.ip |
(1) PIWI.mut |
(6) TESTES |
| CCTGGCCACTTTTCTCCAGGCAACAACCAGGCCTGCAAGCCCTGGACCAAGTGAGTACTGTGGCTGGCTAGGGGTATGGAGGGAATGGGACCAGAGGGTTTGGGCATTTAAGCGGTGCTATCTAGATGACTGTGATGGACTGGATAAGAAAGCCCTGTGCTTAGGGCATCTGACATCTGACATCACGAACACCAACACAGGCTCTACTGTGCAAGGGGCCCCTGCAGATTGAGAGGGGCATGTGAGATCCAAGCCCAGGCCCAGGGACATGTTTGTTCTCACATTGTAGTTCTTCTCCAGGGGGCTACAGAAGTATAGGGTAGGGGTTTGAAAGGGCAGAACCCCAGCCAGGAGCAGGCCAGGGATGAAAACAGGGTGAAGACAGACGCAGACATAGGTACCTGCCTTGTGGGTGGAAGTCTTGGCAGAACTGAAGATGGCTCAGTGCAACTTCCAACACTGTCTCGTCCCACAGTTGTACCTTATCTGGAAAGCAGACCCGCCACCCAGCCAGTGACAGCTTGG .......................................................................................................................................................................................................................................................................................................................................................................................(((......((((.((((..((((....)))).(((..(((((((....((...(((((.......))))))).))))))).))).)))))))).))).................................................... .......................................................................................................................................................................................................................................................................................................................................................................................376................................................................................................475................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR037898(GSM510434) ovary_rep3. (ovary) | GSM475281(GSM475281) total RNA. (testes) |
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| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAACACTGTCTCGTCCCACAGc................................................. | 24 | c | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTACCTTATCTGGAAAGCAGACCCGCC..................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTACCTTATCTGGAAAGCAGACCCG....................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTTATCTGGAAAGCAGACCCGCCA.................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTACCTTATCTGGAAAGCAGACCCGC...................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - |
| ......................................................GTACTGTGGCTGGaagt...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 17 | aagt | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - |
| .......................CAACCAGGCCTGCAcaga.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | caga | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - |
| ......................ACAACCAGGCCTGCAcaga.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | caga | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 |
| CCTGGCCACTTTTCTCCAGGCAACAACCAGGCCTGCAAGCCCTGGACCAAGTGAGTACTGTGGCTGGCTAGGGGTATGGAGGGAATGGGACCAGAGGGTTTGGGCATTTAAGCGGTGCTATCTAGATGACTGTGATGGACTGGATAAGAAAGCCCTGTGCTTAGGGCATCTGACATCTGACATCACGAACACCAACACAGGCTCTACTGTGCAAGGGGCCCCTGCAGATTGAGAGGGGCATGTGAGATCCAAGCCCAGGCCCAGGGACATGTTTGTTCTCACATTGTAGTTCTTCTCCAGGGGGCTACAGAAGTATAGGGTAGGGGTTTGAAAGGGCAGAACCCCAGCCAGGAGCAGGCCAGGGATGAAAACAGGGTGAAGACAGACGCAGACATAGGTACCTGCCTTGTGGGTGGAAGTCTTGGCAGAACTGAAGATGGCTCAGTGCAACTTCCAACACTGTCTCGTCCCACAGTTGTACCTTATCTGGAAAGCAGACCCGCCACCCAGCCAGTGACAGCTTGG .......................................................................................................................................................................................................................................................................................................................................................................................(((......((((.((((..((((....)))).(((..(((((((....((...(((((.......))))))).))))))).))).)))))))).))).................................................... .......................................................................................................................................................................................................................................................................................................................................................................................376................................................................................................475................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR037898(GSM510434) ovary_rep3. (ovary) | GSM475281(GSM475281) total RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|
| .....TTTTCTCCAGGCAAagac...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | agac | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - |