| Gene: Atad3a | ID: uc008wen.1_intron_6_0_chr4_155124708_r | SPECIES: mm9 |
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(3) OTHER.mut |
(3) PIWI.ip |
(15) TESTES |
| GGCGACTGGTCAGCAGACCCCAGGATGCATTGGAGGGCGTCATCCTCAGTGTGAGTTGATGTGGCATCTGTGGCTTGTGGCCCTGTGGGTCCCAGGGGAGGGACAACAGAGTTGAGCTGTTGTGTTTATGTGATCCTTGTGCTCGTGGCTTTGGGACCCTGAAACGCATGTTACTGTCAACCAAACCTATATTCGGATACCTCATAGGCCAGTCTGTATGTACAAGGAGTAGGCTGCACTAGAATACCTGTGGTCCTTCCACTCCCTAAGGCTGTAGGCTGGGAGACCAGGTTCCCCAAACCTCATCTTGCTCTGGCAGCCTAGCCTGGAGGCACGGGTCCGAGATATTGCCATCGCAACAAGAAATAC ...........................................................................................................................................................................................................................((....((((((((.((.........(((((.((.....)).(((((...(((.....))))))))..)))))...........)).)))))))).)).................................................... ...........................................................................................................................................................................................................................220................................................................................................319................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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| ....................................................................................................................................................................................................................TCTGTATGTACAAGGAGTAGGCTGCACTAGAATACCTGTGGTCCTTCCACTC......................................................................................................... | 52 | 1 | 42.00 | 42.00 | 42.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..CGACTGGTCAGCAGAat.............................................................................................................................................................................................................................................................................................................................................................. | 17 | at | 5.00 | 0.00 | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................CGCATGTTACTGTCAACC........................................................................................................................................................................................... | 18 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................ATCCTCAGTGTGAGTTGATGTGGCATCTGTGG........................................................................................................................................................................................................................................................................................................ | 32 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................CCAGGGGAGGGACAACAGA................................................................................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGTTGATGTGGCATCTGTGGCTT..................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................................................................................................................................................ATGTACAAGGAGTAGGCTGCACTAGAATAC.......................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................TGGAGGCACGGGTCCGAGATATTGCC................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................CAAGGAGTAGGCTGCACTAGAATACCT........................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......TGGTCAGCAGACCCCAGGATGCATTGGAGt............................................................................................................................................................................................................................................................................................................................................. | 30 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................CTAAGGCTGTAGGCTGGGAGAC.................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TAGGCCAGTCTGTATGTACAAGGAG............................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........GTCAGCAGACCCCAGGATGCATTGGAG.............................................................................................................................................................................................................................................................................................................................................. | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| .....................................................................................................................................................................................................................................................................CTCCCTAAGGCTGTAGG........................................................................................... | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| .................................AGGGCGTCATCCTCAGT............................................................................................................................................................................................................................................................................................................................... | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................GCCATCGCAACAAGAAATA. | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| GGCGACTGGTCAGCAGACCCCAGGATGCATTGGAGGGCGTCATCCTCAGTGTGAGTTGATGTGGCATCTGTGGCTTGTGGCCCTGTGGGTCCCAGGGGAGGGACAACAGAGTTGAGCTGTTGTGTTTATGTGATCCTTGTGCTCGTGGCTTTGGGACCCTGAAACGCATGTTACTGTCAACCAAACCTATATTCGGATACCTCATAGGCCAGTCTGTATGTACAAGGAGTAGGCTGCACTAGAATACCTGTGGTCCTTCCACTCCCTAAGGCTGTAGGCTGGGAGACCAGGTTCCCCAAACCTCATCTTGCTCTGGCAGCCTAGCCTGGAGGCACGGGTCCGAGATATTGCCATCGCAACAAGAAATAC ...........................................................................................................................................................................................................................((....((((((((.((.........(((((.((.....)).(((((...(((.....))))))))..)))))...........)).)))))))).)).................................................... ...........................................................................................................................................................................................................................220................................................................................................319................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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