| Gene: Rer1 | ID: uc008wcu.1_intron_6_0_chr4_154457427_r.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(19) TESTES |
| CATTAAGACCAAGCTCAGGGCTTGGCTGCAGTTGAAGGCTGCCTGTGTGTCTGCCTTTAGAAGAGCATCATTTTGCACATGGTGAACCTCAGGCTGACTGTGGCTAGAGAGGGTGTTGAAGGCCTTTCAGCTGCTCAGCACAAGTAGATTTAAGTCATACTTGAACTACAGTTTGTTTCTCCTCTTCACCCTGTGGGTAGCAGAGGGACCTGGGACAGGCACTGCTCATAGACTTGAGAGGACCAGGACC ....................................................(((.((((..(((((((((.......))))))...)))...))))....)))..(((((.(((((((.(((......)))..)))))))..((((.((((((.....)))))))))).......)))))..................................................................... ..................................................51..................................................................................................................................183................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT4() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR037901(GSM510437) testes_rep2. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................TCAGGCTGACTGTGGCTAGAGAGGG......................................................................................................................................... | 25 | 1 | 9.00 | 9.00 | - | 8.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................TAGAAGAGCATCATTTTGCACATGGTG...................................................................................................................................................................... | 27 | 1 | 6.00 | 6.00 | - | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...........................................TGTGTGTCTGCCTTTAGAAGAGCATC..................................................................................................................................................................................... | 26 | 1 | 4.00 | 4.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TGTGTCTGCCTTTAGAAGAGCATCATTT................................................................................................................................................................................. | 28 | 1 | 4.00 | 4.00 | - | - | 1.00 | 1.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................TGCACATGGTGAACCTCAGGCTGACTG...................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TGTGGGTAGCAGAGGGACCTGGGACAG................................ | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - |
| .......................................TGCCTGTGTGTCTGCCTTTAGAAGAGC........................................................................................................................................................................................ | 27 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................TCATAGACTTGAGAGGACCAGGACC | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TGGGACAGGCACTGCTCATAGACTTa.............. | 26 | a | 2.00 | 0.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................TGGTGAACCTCAGGCTGACTGTGGCT................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................TGCACATGGTGAACCTCAGGCTGACTGTGGC.................................................................................................................................................. | 31 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................TGCCTGTGTGTCTGCCTTTAGAAGAGCAT...................................................................................................................................................................................... | 29 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................GAGGGACCTGGGACAGGCA............................. | 19 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TGCTCATAGACTTGAGAGGACCAGGAC. | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............TCAGGGCTTGGCTGCAGTTG........................................................................................................................................................................................................................ | 20 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................TGAACTACAGTTTGTTTCTCCTCTT................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................AGAGGGACCTGGGACAGGCACTGCTCAT..................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................CTCAGCACAAGTAcacg.................................................................................................... | 17 | cacg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................................................................................................................................................................................GAGGGACCTGGGACAGGCAC............................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................................................................TGTGGCTAGAGAGGGTGTTGAAGG................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGCAGAGGGACCTGGGACAGGCAC............................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TGTGTCTGCCTTTAGAAGAGCATCATTTT................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................TTTTGCACATGGTGAACCTCAGGC............................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................TCTGCCTTTAGAAGAGCATCATTTTGCACA........................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................................................TCATTTTGCACATGGTGAACCTCAGGC............................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................GGCTGACTGTGGCTAGAGAGGGTG....................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TGTGTCTGCCTTTAGAAGAGCATCA.................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TGCTCATAGACTTGAGAGGACCAGGACa | 28 | a | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................TGCCTGTGTGTCTGCCTTTAGAAGA.......................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .............................................................................................................................................................................................................................CTGCTCATAGACTTGAGAGGACCAGGAC. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TGGGACAGGCACTGCTCATAGACTTGAGA........... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................CCTTTAGAAGAGCATCATTTTGCACATG......................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TGTGTCTGCCTTTAGAAGAGCATCAT................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TGACTGTGGCTAGAGAGGGTGTTGgag................................................................................................................................. | 27 | gag | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TGGGACAGGCACTGCTCATAGACTTG.............. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TGACTGTGGCTAGAGAGGGTGTTGA................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................CAGGCTGACTGTGGCTAGAGAGGGTGT...................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................CTGCTCATAGACTTGAGAGGACCAGGA.. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................ACATGGTGAACCTCAGGC............................................................................................................................................................ | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| .................................................................................................CTGTGGCTAGAGAGGGT........................................................................................................................................ | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| CATTAAGACCAAGCTCAGGGCTTGGCTGCAGTTGAAGGCTGCCTGTGTGTCTGCCTTTAGAAGAGCATCATTTTGCACATGGTGAACCTCAGGCTGACTGTGGCTAGAGAGGGTGTTGAAGGCCTTTCAGCTGCTCAGCACAAGTAGATTTAAGTCATACTTGAACTACAGTTTGTTTCTCCTCTTCACCCTGTGGGTAGCAGAGGGACCTGGGACAGGCACTGCTCATAGACTTGAGAGGACCAGGACC ....................................................(((.((((..(((((((((.......))))))...)))...))))....)))..(((((.(((((((.(((......)))..)))))))..((((.((((((.....)))))))))).......)))))..................................................................... ..................................................51..................................................................................................................................183................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT4() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR037901(GSM510437) testes_rep2. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................GTCTGCCTTTAGAAgatc............................................................................................................................................................................................ | 18 | gatc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |